Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC13.27□□□□□ -0.29
Trav6-4A0A075B6B4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Gm715-201ENSMUST00000117865 831 ntBASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Timm23-208ENSMUST00000226683 750 ntBASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav6-4A0A075B6B4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Gm24841-201ENSMUST00000158676 357 ntBASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-4A0A075B6B4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Trav6-4A0A075B6B4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-4A0A075B6B4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-4A0A075B6B4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-4A0A075B6B4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-4A0A075B6B4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav6-4A0A075B6B4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav6-4A0A075B6B4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-4A0A075B6B4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-4A0A075B6B4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-4A0A075B6B4 Gm12085-201ENSMUST00000119263 940 ntBASIC13.24□□□□□ -0.29
Trav6-4A0A075B6B4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav6-4A0A075B6B4 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-4A0A075B6B4 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav6-4A0A075B6B4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav6-4A0A075B6B4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-4A0A075B6B4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trav6-4A0A075B6B4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-4A0A075B6B4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-4A0A075B6B4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-4A0A075B6B4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-4A0A075B6B4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-4A0A075B6B4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav6-4A0A075B6B4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-4A0A075B6B4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav6-4A0A075B6B4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms