Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Tgds-204ENSMUST00000228543 1594 ntBASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav3-4A0A075B654 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav3-4A0A075B654 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav3-4A0A075B654 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav3-4A0A075B654 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Trav3-4A0A075B654 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-4A0A075B654 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-4A0A075B654 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav3-4A0A075B654 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trav3-4A0A075B654 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-4A0A075B654 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-4A0A075B654 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-4A0A075B654 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-4A0A075B654 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav3-4A0A075B654 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-4A0A075B654 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-4A0A075B654 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-4A0A075B654 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav3-4A0A075B654 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Trav3-4A0A075B654 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-4A0A075B654 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-4A0A075B654 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-4A0A075B654 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav3-4A0A075B654 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav3-4A0A075B654 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.63□□□□□ -0.55
Trav3-4A0A075B654 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav3-4A0A075B654 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav3-4A0A075B654 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-4A0A075B654 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-4A0A075B654 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-4A0A075B654 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-4A0A075B654 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-4A0A075B654 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-4A0A075B654 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-4A0A075B654 Gm45212-201ENSMUST00000205831 3403 ntBASIC11.62□□□□□ -0.55
Trav3-4A0A075B654 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-4A0A075B654 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-4A0A075B654 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-4A0A075B654 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC11.62□□□□□ -0.55
Trav3-4A0A075B654 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav3-4A0A075B654 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC11.62□□□□□ -0.55
Trav3-4A0A075B654 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-4A0A075B654 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-4A0A075B654 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav3-4A0A075B654 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav3-4A0A075B654 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-4A0A075B654 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav3-4A0A075B654 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-4A0A075B654 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav3-4A0A075B654 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-4A0A075B654 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav3-4A0A075B654 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Trav3-4A0A075B654 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
Trav3-4A0A075B654 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms