Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav14n-3A0A075B645 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav14n-3A0A075B645 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav14n-3A0A075B645 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav14n-3A0A075B645 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav14n-3A0A075B645 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav14n-3A0A075B645 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav14n-3A0A075B645 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav14n-3A0A075B645 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav14n-3A0A075B645 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav14n-3A0A075B645 Gm14117-201ENSMUST00000122417 843 ntBASIC13.05□□□□□ -0.32
Trav14n-3A0A075B645 Gm45102-201ENSMUST00000207427 857 ntBASIC13.05□□□□□ -0.32
Trav14n-3A0A075B645 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav14n-3A0A075B645 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav14n-3A0A075B645 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav14n-3A0A075B645 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav14n-3A0A075B645 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav14n-3A0A075B645 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav14n-3A0A075B645 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav14n-3A0A075B645 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav14n-3A0A075B645 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav14n-3A0A075B645 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav14n-3A0A075B645 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav14n-3A0A075B645 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav14n-3A0A075B645 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav14n-3A0A075B645 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Gm43173-201ENSMUST00000202246 593 ntBASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav14n-3A0A075B645 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav14n-3A0A075B645 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav14n-3A0A075B645 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav14n-3A0A075B645 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav14n-3A0A075B645 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav14n-3A0A075B645 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav14n-3A0A075B645 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav14n-3A0A075B645 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav14n-3A0A075B645 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
Trav14n-3A0A075B645 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
Trav14n-3A0A075B645 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav14n-3A0A075B645 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav14n-3A0A075B645 Mir7075-201ENSMUST00000184187 82 ntBASIC13.03□□□□□ -0.32
Trav14n-3A0A075B645 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav14n-3A0A075B645 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav14n-3A0A075B645 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav14n-3A0A075B645 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav14n-3A0A075B645 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav14n-3A0A075B645 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav14n-3A0A075B645 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav14n-3A0A075B645 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav14n-3A0A075B645 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav14n-3A0A075B645 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav14n-3A0A075B645 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav14n-3A0A075B645 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.02□□□□□ -0.32
Trav14n-3A0A075B645 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav14n-3A0A075B645 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav14n-3A0A075B645 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav14n-3A0A075B645 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav14n-3A0A075B645 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav14n-3A0A075B645 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav14n-3A0A075B645 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav14n-3A0A075B645 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav14n-3A0A075B645 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav14n-3A0A075B645 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav14n-3A0A075B645 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav14n-3A0A075B645 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav14n-3A0A075B645 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav14n-3A0A075B645 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav14n-3A0A075B645 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav14n-3A0A075B645 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav14n-3A0A075B645 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms