Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-7-dv9A0A075B639 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav6-7-dv9A0A075B639 Gm12527-201ENSMUST00000117967 564 ntBASIC15.28■□□□□ 0.04
Trav6-7-dv9A0A075B639 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav6-7-dv9A0A075B639 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.28■□□□□ 0.04
Trav6-7-dv9A0A075B639 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav6-7-dv9A0A075B639 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Trav6-7-dv9A0A075B639 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-7-dv9A0A075B639 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav6-7-dv9A0A075B639 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav6-7-dv9A0A075B639 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-7-dv9A0A075B639 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-7-dv9A0A075B639 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-7-dv9A0A075B639 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-7-dv9A0A075B639 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-7-dv9A0A075B639 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-7-dv9A0A075B639 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-7-dv9A0A075B639 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-7-dv9A0A075B639 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-7-dv9A0A075B639 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-7-dv9A0A075B639 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav6-7-dv9A0A075B639 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-7-dv9A0A075B639 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.27■□□□□ 0.04
Trav6-7-dv9A0A075B639 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.27■□□□□ 0.04
Trav6-7-dv9A0A075B639 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6-7-dv9A0A075B639 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6-7-dv9A0A075B639 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6-7-dv9A0A075B639 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6-7-dv9A0A075B639 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6-7-dv9A0A075B639 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trav6-7-dv9A0A075B639 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Trav6-7-dv9A0A075B639 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6-7-dv9A0A075B639 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-7-dv9A0A075B639 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-7-dv9A0A075B639 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.26■□□□□ 0.03
Trav6-7-dv9A0A075B639 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-7-dv9A0A075B639 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-7-dv9A0A075B639 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav6-7-dv9A0A075B639 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-7-dv9A0A075B639 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav6-7-dv9A0A075B639 Gm15378-201ENSMUST00000121894 207 ntBASIC15.26■□□□□ 0.03
Trav6-7-dv9A0A075B639 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-7-dv9A0A075B639 Gm10517-202ENSMUST00000192970 758 ntBASIC15.26■□□□□ 0.03
Trav6-7-dv9A0A075B639 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-7-dv9A0A075B639 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.26■□□□□ 0.03
Trav6-7-dv9A0A075B639 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-7-dv9A0A075B639 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-7-dv9A0A075B639 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-7-dv9A0A075B639 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-7-dv9A0A075B639 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-7-dv9A0A075B639 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-7-dv9A0A075B639 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-7-dv9A0A075B639 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-7-dv9A0A075B639 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-7-dv9A0A075B639 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-7-dv9A0A075B639 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trav6-7-dv9A0A075B639 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-7-dv9A0A075B639 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-7-dv9A0A075B639 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-7-dv9A0A075B639 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.25■□□□□ 0.03
Trav6-7-dv9A0A075B639 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-7-dv9A0A075B639 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-7-dv9A0A075B639 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-7-dv9A0A075B639 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-7-dv9A0A075B639 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-7-dv9A0A075B639 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-7-dv9A0A075B639 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-7-dv9A0A075B639 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-7-dv9A0A075B639 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-7-dv9A0A075B639 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav6-7-dv9A0A075B639 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-7-dv9A0A075B639 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-7-dv9A0A075B639 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-7-dv9A0A075B639 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-7-dv9A0A075B639 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-7-dv9A0A075B639 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-7-dv9A0A075B639 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav6-7-dv9A0A075B639 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-7-dv9A0A075B639 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav6-7-dv9A0A075B639 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-7-dv9A0A075B639 Gm5643-201ENSMUST00000117081 966 ntBASIC15.24■□□□□ 0.03
Trav6-7-dv9A0A075B639 Gm43183-201ENSMUST00000200632 547 ntBASIC15.24■□□□□ 0.03
Trav6-7-dv9A0A075B639 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-7-dv9A0A075B639 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav6-7-dv9A0A075B639 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-7-dv9A0A075B639 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Trav6-7-dv9A0A075B639 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav6-7-dv9A0A075B639 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-7-dv9A0A075B639 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-7-dv9A0A075B639 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-7-dv9A0A075B639 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-7-dv9A0A075B639 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-7-dv9A0A075B639 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-7-dv9A0A075B639 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-7-dv9A0A075B639 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-7-dv9A0A075B639 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-7-dv9A0A075B639 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-7-dv9A0A075B639 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.23■□□□□ 0.03
Trav6-7-dv9A0A075B639 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-7-dv9A0A075B639 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms