Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Trav8n-2A0A075B633 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8n-2A0A075B633 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8n-2A0A075B633 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
Trav8n-2A0A075B633 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.76■□□□□ 0.11
Trav8n-2A0A075B633 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav8n-2A0A075B633 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8n-2A0A075B633 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.76■□□□□ 0.11
Trav8n-2A0A075B633 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Trav8n-2A0A075B633 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Trav8n-2A0A075B633 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Trav8n-2A0A075B633 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8n-2A0A075B633 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8n-2A0A075B633 Mzt1-203ENSMUST00000227948 952 ntBASIC15.76■□□□□ 0.11
Trav8n-2A0A075B633 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8n-2A0A075B633 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8n-2A0A075B633 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav8n-2A0A075B633 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8n-2A0A075B633 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8n-2A0A075B633 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav8n-2A0A075B633 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8n-2A0A075B633 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav8n-2A0A075B633 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav8n-2A0A075B633 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8n-2A0A075B633 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8n-2A0A075B633 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8n-2A0A075B633 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8n-2A0A075B633 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.75■□□□□ 0.11
Trav8n-2A0A075B633 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8n-2A0A075B633 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trav8n-2A0A075B633 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8n-2A0A075B633 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8n-2A0A075B633 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8n-2A0A075B633 Mir8112-201ENSMUST00000184382 131 ntBASIC15.75■□□□□ 0.11
Trav8n-2A0A075B633 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8n-2A0A075B633 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8n-2A0A075B633 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8n-2A0A075B633 Idnk-204ENSMUST00000226010 1898 ntBASIC15.75■□□□□ 0.11
Trav8n-2A0A075B633 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8n-2A0A075B633 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8n-2A0A075B633 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8n-2A0A075B633 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.74■□□□□ 0.11
Trav8n-2A0A075B633 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trav8n-2A0A075B633 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8n-2A0A075B633 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav8n-2A0A075B633 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8n-2A0A075B633 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8n-2A0A075B633 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8n-2A0A075B633 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8n-2A0A075B633 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8n-2A0A075B633 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8n-2A0A075B633 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8n-2A0A075B633 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Trav8n-2A0A075B633 Gm28659-201ENSMUST00000188013 759 ntBASIC15.73■□□□□ 0.11
Trav8n-2A0A075B633 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav8n-2A0A075B633 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8n-2A0A075B633 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav8n-2A0A075B633 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8n-2A0A075B633 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8n-2A0A075B633 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8n-2A0A075B633 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav8n-2A0A075B633 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trav8n-2A0A075B633 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8n-2A0A075B633 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.72■□□□□ 0.11
Trav8n-2A0A075B633 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav8n-2A0A075B633 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8n-2A0A075B633 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav8n-2A0A075B633 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8n-2A0A075B633 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8n-2A0A075B633 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms