Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm12045-201ENSMUST00000122122 573 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Gm25105-201ENSMUST00000122477 130 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Gm2020-201ENSMUST00000145242 579 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Gm22516-201ENSMUST00000158266 124 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Gm2343-201ENSMUST00000161177 1042 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Gm23816-201ENSMUST00000179617 132 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Gm27834-201ENSMUST00000183427 125 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Gm18486-201ENSMUST00000184040 298 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Gm28623-201ENSMUST00000187219 192 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Gm29045-201ENSMUST00000187278 698 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Gm37550-201ENSMUST00000193230 463 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Gm43652-201ENSMUST00000196219 675 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Gm5551-201ENSMUST00000199720 690 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Gm35931-201ENSMUST00000203931 448 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Gm45048-201ENSMUST00000207058 429 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
H2afb1S4R1E0 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Gm8231-201ENSMUST00000221617 783 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
H2afb1S4R1E0 AC138667.2-201ENSMUST00000224880 598 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 CT025603.4-201ENSMUST00000225777 413 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 AC160930.1-201ENSMUST00000227194 337 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 AC125523.1-201ENSMUST00000228018 934 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Gm16261-201ENSMUST00000096813 205 ntBASIC3.06□□□□□ -1.92
H2afb1S4R1E0 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
H2afb1S4R1E0 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Gm4855-201ENSMUST00000192270 1967 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Gm22758-201ENSMUST00000102275 96 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Gm24125-201ENSMUST00000104105 137 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Gm25563-201ENSMUST00000104603 74 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Gm12125-201ENSMUST00000117261 736 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Gm9157-201ENSMUST00000117673 225 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Gm12722-201ENSMUST00000118507 493 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Gm14975-201ENSMUST00000118741 664 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Gm13602-201ENSMUST00000122405 493 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Gm16274-201ENSMUST00000139251 592 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Gm22555-201ENSMUST00000157801 62 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Gm22521-201ENSMUST00000158272 134 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Gm24498-201ENSMUST00000158445 102 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
H2afb1S4R1E0 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Gm27392-201ENSMUST00000185041 101 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Mir6943-201ENSMUST00000185186 66 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Gm37417-201ENSMUST00000195257 454 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Ighv1-68-201ENSMUST00000198789 294 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Gm44425-201ENSMUST00000203739 429 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Gm10988-201ENSMUST00000209150 1088 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Gm18597-201ENSMUST00000209519 694 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.05□□□□□ -1.92
H2afb1S4R1E0 AC102291.2-201ENSMUST00000228083 367 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 AC131029.2-202ENSMUST00000228430 496 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
H2afb1S4R1E0 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Gm14797-201ENSMUST00000119378 1480 ntBASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.04□□□□□ -1.92
H2afb1S4R1E0 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms