Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 AC115047.2-201ENSMUST00000214421 1848 ntBASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 AC133076.2-201ENSMUST00000227678 3532 ntBASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 Gm23578-201ENSMUST00000103943 104 ntBASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 Gm15206-201ENSMUST00000119143 454 ntBASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 Gm13692-201ENSMUST00000120774 371 ntBASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 Gm14875-201ENSMUST00000120881 319 ntBASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 Gm8289-201ENSMUST00000144814 1182 ntBASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 Ear-ps4-201ENSMUST00000166834 450 ntBASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 Gm20660-201ENSMUST00000177515 289 ntBASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 Mir7222-201ENSMUST00000183740 75 ntBASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 Gm29596-201ENSMUST00000185710 385 ntBASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 Gm28957-201ENSMUST00000190174 373 ntBASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 AC152979.3-201ENSMUST00000217720 479 ntBASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 AC241593.1-201ENSMUST00000224768 397 ntBASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 Gm24611-201ENSMUST00000083272 107 ntBASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Prpf40aQ9R1C7 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Prpf40aQ9R1C7 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Prpf40aQ9R1C7 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Prpf40aQ9R1C7 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.4□□□□□ -1.55
Prpf40aQ9R1C7 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Gm13321-201ENSMUST00000117101 400 ntBASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Gm12125-201ENSMUST00000117261 736 ntBASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Gm11790-201ENSMUST00000119569 455 ntBASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Gm25333-201ENSMUST00000158035 246 ntBASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Mir6416-201ENSMUST00000183664 117 ntBASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Gm27492-201ENSMUST00000185194 187 ntBASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Gm28920-201ENSMUST00000189957 699 ntBASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Gm38080-201ENSMUST00000194035 268 ntBASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Gm44261-201ENSMUST00000203337 209 ntBASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Gm44977-201ENSMUST00000205283 420 ntBASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Gm44881-201ENSMUST00000205425 367 ntBASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Gm16419-201ENSMUST00000221057 625 ntBASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 AC122397.2-201ENSMUST00000227422 686 ntBASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Gm10088-201ENSMUST00000074116 423 ntBASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Gm22997-201ENSMUST00000082845 107 ntBASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Mir10a-201ENSMUST00000083585 110 ntBASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Gm45131-201ENSMUST00000208051 2582 ntBASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Prpf40aQ9R1C7 Gm43185-201ENSMUST00000197507 2775 ntBASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Gm43663-201ENSMUST00000198643 1505 ntBASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 AC160931.3-201ENSMUST00000222111 2267 ntBASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Gm25419-201ENSMUST00000104215 191 ntBASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Gm11432-201ENSMUST00000117334 231 ntBASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Gm11633-201ENSMUST00000118176 444 ntBASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Gm12379-201ENSMUST00000119607 391 ntBASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Gm12808-201ENSMUST00000120597 404 ntBASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Gm23921-201ENSMUST00000175258 107 ntBASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Gm22286-201ENSMUST00000179708 107 ntBASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Gm8874-201ENSMUST00000196826 286 ntBASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Gm25203-202ENSMUST00000200458 216 ntBASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Gm45315-201ENSMUST00000209283 333 ntBASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 AC139750.2-201ENSMUST00000224424 386 ntBASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 AC101945.3-201ENSMUST00000226568 153 ntBASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Gm24856-201ENSMUST00000082809 107 ntBASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Gm25203-201ENSMUST00000082842 215 ntBASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Gm25258-201ENSMUST00000083049 107 ntBASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms