Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm43424-201ENSMUST00000200484 253 ntBASIC5.05□□□□□ -1.6
Nubp1Q9R060 Gm45660-201ENSMUST00000210267 151 ntBASIC5.05□□□□□ -1.6
Nubp1Q9R060 AC098718.2-201ENSMUST00000226822 285 ntBASIC5.05□□□□□ -1.6
Nubp1Q9R060 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Nubp1Q9R060 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Nubp1Q9R060 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Nubp1Q9R060 Gm37788-201ENSMUST00000193958 2705 ntBASIC5.05□□□□□ -1.6
Nubp1Q9R060 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Nubp1Q9R060 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Nubp1Q9R060 Gm7135-202ENSMUST00000191257 1905 ntBASIC5.05□□□□□ -1.6
Nubp1Q9R060 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Nubp1Q9R060 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Nubp1Q9R060 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Nubp1Q9R060 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Nubp1Q9R060 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Nubp1Q9R060 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
Nubp1Q9R060 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Nubp1Q9R060 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Nubp1Q9R060 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Nubp1Q9R060 Gm22272-201ENSMUST00000104039 134 ntBASIC5.04□□□□□ -1.6
Nubp1Q9R060 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC5.04□□□□□ -1.6
Nubp1Q9R060 Gm13338-201ENSMUST00000120235 361 ntBASIC5.04□□□□□ -1.6
Nubp1Q9R060 Gm5396-201ENSMUST00000121222 532 ntBASIC5.04□□□□□ -1.6
Nubp1Q9R060 Gm12071-201ENSMUST00000121968 469 ntBASIC5.04□□□□□ -1.6
Nubp1Q9R060 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Nubp1Q9R060 Gm22320-201ENSMUST00000157149 312 ntBASIC5.04□□□□□ -1.6
Nubp1Q9R060 Gm25383-201ENSMUST00000157810 144 ntBASIC5.04□□□□□ -1.6
Nubp1Q9R060 Gm24131-201ENSMUST00000158539 107 ntBASIC5.04□□□□□ -1.6
Nubp1Q9R060 Gm20674-201ENSMUST00000177452 369 ntBASIC5.04□□□□□ -1.6
Nubp1Q9R060 Gm28848-201ENSMUST00000189984 168 ntBASIC5.04□□□□□ -1.6
Nubp1Q9R060 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC5.04□□□□□ -1.6
Nubp1Q9R060 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.04□□□□□ -1.6
Nubp1Q9R060 CT010506.3-201ENSMUST00000223699 410 ntBASIC5.04□□□□□ -1.6
Nubp1Q9R060 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Nubp1Q9R060 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Nubp1Q9R060 Gm23624-201ENSMUST00000082463 321 ntBASIC5.04□□□□□ -1.6
Nubp1Q9R060 Mir31-201ENSMUST00000083474 106 ntBASIC5.04□□□□□ -1.6
Nubp1Q9R060 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Nubp1Q9R060 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Nubp1Q9R060 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Nubp1Q9R060 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Nubp1Q9R060 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.04□□□□□ -1.6
Nubp1Q9R060 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Nubp1Q9R060 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Nubp1Q9R060 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Nubp1Q9R060 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.04□□□□□ -1.6
Nubp1Q9R060 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Nubp1Q9R060 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Nubp1Q9R060 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Nubp1Q9R060 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Nubp1Q9R060 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.04□□□□□ -1.6
Nubp1Q9R060 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nubp1Q9R060 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Nubp1Q9R060 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nubp1Q9R060 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nubp1Q9R060 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.03□□□□□ -1.6
Nubp1Q9R060 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Nubp1Q9R060 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nubp1Q9R060 Gm15660-201ENSMUST00000118997 478 ntBASIC5.03□□□□□ -1.6
Nubp1Q9R060 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC5.03□□□□□ -1.6
Nubp1Q9R060 Gm26275-201ENSMUST00000157101 268 ntBASIC5.03□□□□□ -1.6
Nubp1Q9R060 Gm23954-201ENSMUST00000157213 353 ntBASIC5.03□□□□□ -1.6
Nubp1Q9R060 Gm25227-201ENSMUST00000158204 112 ntBASIC5.03□□□□□ -1.6
Nubp1Q9R060 Gm24359-201ENSMUST00000158418 221 ntBASIC5.03□□□□□ -1.6
Nubp1Q9R060 Mir1963-201ENSMUST00000158594 59 ntBASIC5.03□□□□□ -1.6
Nubp1Q9R060 Gm25534-201ENSMUST00000175365 125 ntBASIC5.03□□□□□ -1.6
Nubp1Q9R060 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.03□□□□□ -1.6
Nubp1Q9R060 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Nubp1Q9R060 Gm45007-201ENSMUST00000206237 366 ntBASIC5.03□□□□□ -1.6
Nubp1Q9R060 Gm45013-201ENSMUST00000206883 178 ntBASIC5.03□□□□□ -1.6
Nubp1Q9R060 Gm45249-201ENSMUST00000211021 348 ntBASIC5.03□□□□□ -1.6
Nubp1Q9R060 AC164561.1-201ENSMUST00000220414 115 ntBASIC5.03□□□□□ -1.6
Nubp1Q9R060 Gm24356-201ENSMUST00000082859 106 ntBASIC5.03□□□□□ -1.6
Nubp1Q9R060 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nubp1Q9R060 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nubp1Q9R060 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nubp1Q9R060 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Nubp1Q9R060 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Nubp1Q9R060 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Nubp1Q9R060 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nubp1Q9R060 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nubp1Q9R060 Gm4746-201ENSMUST00000120395 2406 ntBASIC5.03□□□□□ -1.6
Nubp1Q9R060 Gm45633-201ENSMUST00000210669 3253 ntBASIC5.03□□□□□ -1.6
Nubp1Q9R060 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nubp1Q9R060 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nubp1Q9R060 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nubp1Q9R060 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nubp1Q9R060 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nubp1Q9R060 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Nubp1Q9R060 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nubp1Q9R060 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.02□□□□□ -1.61
Nubp1Q9R060 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nubp1Q9R060 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Nubp1Q9R060 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nubp1Q9R060 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nubp1Q9R060 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Nubp1Q9R060 Gm25564-201ENSMUST00000104604 132 ntBASIC5.02□□□□□ -1.61
Nubp1Q9R060 Mir294-201ENSMUST00000104710 84 ntBASIC5.02□□□□□ -1.61
Nubp1Q9R060 Mir872-201ENSMUST00000104728 81 ntBASIC5.02□□□□□ -1.61
Nubp1Q9R060 Gm13077-201ENSMUST00000121941 484 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms