Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm16289-201ENSMUST00000162079 183 ntBASIC2.58□□□□□ -2
Lsm1Q8VC85 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC2.58□□□□□ -2
Lsm1Q8VC85 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Lsm1Q8VC85 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
Lsm1Q8VC85 Gm45023-201ENSMUST00000207951 379 ntBASIC2.58□□□□□ -2
Lsm1Q8VC85 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC2.58□□□□□ -2
Lsm1Q8VC85 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC2.58□□□□□ -2
Lsm1Q8VC85 Gm18043-201ENSMUST00000216741 739 ntBASIC2.58□□□□□ -2
Lsm1Q8VC85 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC2.58□□□□□ -2
Lsm1Q8VC85 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.58□□□□□ -2
Lsm1Q8VC85 AC133176.1-201ENSMUST00000226668 219 ntBASIC2.58□□□□□ -2
Lsm1Q8VC85 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.58□□□□□ -2
Lsm1Q8VC85 Gm6030-201ENSMUST00000078768 402 ntBASIC2.58□□□□□ -2
Lsm1Q8VC85 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Lsm1Q8VC85 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC2.58□□□□□ -2
Lsm1Q8VC85 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Lsm1Q8VC85 Mir208b-201ENSMUST00000104735 77 ntBASIC2.57□□□□□ -2
Lsm1Q8VC85 Gm11221-201ENSMUST00000117230 597 ntBASIC2.57□□□□□ -2
Lsm1Q8VC85 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.57□□□□□ -2
Lsm1Q8VC85 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.57□□□□□ -2
Lsm1Q8VC85 Gm14101-201ENSMUST00000121502 473 ntBASIC2.57□□□□□ -2
Lsm1Q8VC85 Gm22792-201ENSMUST00000157225 133 ntBASIC2.57□□□□□ -2
Lsm1Q8VC85 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC2.57□□□□□ -2
Lsm1Q8VC85 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Lsm1Q8VC85 Gm7858-201ENSMUST00000190177 622 ntBASIC2.57□□□□□ -2
Lsm1Q8VC85 Gm42465-201ENSMUST00000197036 492 ntBASIC2.57□□□□□ -2
Lsm1Q8VC85 Gm24350-202ENSMUST00000198309 132 ntBASIC2.57□□□□□ -2
Lsm1Q8VC85 Gm35570-201ENSMUST00000198730 681 ntBASIC2.57□□□□□ -2
Lsm1Q8VC85 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Lsm1Q8VC85 Gm44903-201ENSMUST00000206840 130 ntBASIC2.57□□□□□ -2
Lsm1Q8VC85 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC2.57□□□□□ -2
Lsm1Q8VC85 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.57□□□□□ -2
Lsm1Q8VC85 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.57□□□□□ -2
Lsm1Q8VC85 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.57□□□□□ -2
Lsm1Q8VC85 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.57□□□□□ -2
Lsm1Q8VC85 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.57□□□□□ -2
Lsm1Q8VC85 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Lsm1Q8VC85 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.56□□□□□ -2
Lsm1Q8VC85 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
Lsm1Q8VC85 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.56□□□□□ -2
Lsm1Q8VC85 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.56□□□□□ -2
Lsm1Q8VC85 Gm26341-201ENSMUST00000104561 134 ntBASIC2.56□□□□□ -2
Lsm1Q8VC85 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Lsm1Q8VC85 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.56□□□□□ -2
Lsm1Q8VC85 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC2.56□□□□□ -2
Lsm1Q8VC85 Gm25280-201ENSMUST00000157269 101 ntBASIC2.56□□□□□ -2
Lsm1Q8VC85 Gm22141-201ENSMUST00000157403 277 ntBASIC2.56□□□□□ -2
Lsm1Q8VC85 Gm22693-201ENSMUST00000175049 442 ntBASIC2.56□□□□□ -2
Lsm1Q8VC85 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC2.56□□□□□ -2
Lsm1Q8VC85 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.56□□□□□ -2
Lsm1Q8VC85 Gm28358-202ENSMUST00000189292 223 ntBASIC2.56□□□□□ -2
Lsm1Q8VC85 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC2.56□□□□□ -2
Lsm1Q8VC85 Gm6140-201ENSMUST00000192494 966 ntBASIC2.56□□□□□ -2
Lsm1Q8VC85 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.56□□□□□ -2
Lsm1Q8VC85 Gm18748-201ENSMUST00000198507 622 ntBASIC2.56□□□□□ -2
Lsm1Q8VC85 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC2.56□□□□□ -2
Lsm1Q8VC85 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.56□□□□□ -2
Lsm1Q8VC85 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.56□□□□□ -2
Lsm1Q8VC85 AC107453.2-201ENSMUST00000227714 655 ntBASIC2.56□□□□□ -2
Lsm1Q8VC85 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.56□□□□□ -2
Lsm1Q8VC85 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Lsm1Q8VC85 Olfr815-201ENSMUST00000071557 951 ntBASIC2.56□□□□□ -2
Lsm1Q8VC85 Olfr895-201ENSMUST00000093864 951 ntBASIC2.56□□□□□ -2
Lsm1Q8VC85 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Lsm1Q8VC85 Gm42968-201ENSMUST00000198578 1372 ntBASIC2.56□□□□□ -2
Lsm1Q8VC85 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.56□□□□□ -2
Lsm1Q8VC85 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.55□□□□□ -2
Lsm1Q8VC85 Gm14973-201ENSMUST00000117248 255 ntBASIC2.55□□□□□ -2
Lsm1Q8VC85 Gm14751-201ENSMUST00000117693 222 ntBASIC2.55□□□□□ -2
Lsm1Q8VC85 Gm23867-201ENSMUST00000122649 274 ntBASIC2.55□□□□□ -2
Lsm1Q8VC85 Gm22769-201ENSMUST00000158367 98 ntBASIC2.55□□□□□ -2
Lsm1Q8VC85 Gm43096-201ENSMUST00000196173 421 ntBASIC2.55□□□□□ -2
Lsm1Q8VC85 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.55□□□□□ -2
Lsm1Q8VC85 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.55□□□□□ -2
Lsm1Q8VC85 Gm44060-201ENSMUST00000204440 410 ntBASIC2.55□□□□□ -2
Lsm1Q8VC85 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Lsm1Q8VC85 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.55□□□□□ -2
Lsm1Q8VC85 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.55□□□□□ -2
Lsm1Q8VC85 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.55□□□□□ -2
Lsm1Q8VC85 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.55□□□□□ -2
Lsm1Q8VC85 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Lsm1Q8VC85 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC2.55□□□□□ -2
Lsm1Q8VC85 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC2.55□□□□□ -2
Lsm1Q8VC85 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Lsm1Q8VC85 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Lsm1Q8VC85 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.54□□□□□ -2
Lsm1Q8VC85 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.54□□□□□ -2
Lsm1Q8VC85 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.54□□□□□ -2
Lsm1Q8VC85 Gm12238-201ENSMUST00000127764 124 ntBASIC2.54□□□□□ -2
Lsm1Q8VC85 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Lsm1Q8VC85 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Lsm1Q8VC85 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.54□□□□□ -2
Lsm1Q8VC85 Mir6383-201ENSMUST00000184545 116 ntBASIC2.54□□□□□ -2
Lsm1Q8VC85 Gm28169-201ENSMUST00000190342 345 ntBASIC2.54□□□□□ -2
Lsm1Q8VC85 Gm37708-201ENSMUST00000192337 895 ntBASIC2.54□□□□□ -2
Lsm1Q8VC85 Gm6321-201ENSMUST00000194460 1090 ntBASIC2.54□□□□□ -2
Lsm1Q8VC85 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC2.54□□□□□ -2
Lsm1Q8VC85 Gm18346-201ENSMUST00000216782 325 ntBASIC2.54□□□□□ -2
Lsm1Q8VC85 Gm6991-201ENSMUST00000218475 1178 ntBASIC2.54□□□□□ -2
Lsm1Q8VC85 CT025552.1-201ENSMUST00000224561 521 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms