Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ushbp1Q8R370 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Gm14910-201ENSMUST00000121037 1805 ntBASIC4.47□□□□□ -1.69
Ushbp1Q8R370 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Gm24374-201ENSMUST00000104394 106 ntBASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Gm6797-201ENSMUST00000119440 512 ntBASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Gm7618-201ENSMUST00000121643 171 ntBASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Gm13406-201ENSMUST00000121991 256 ntBASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Gm23867-201ENSMUST00000122649 274 ntBASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Gm25335-201ENSMUST00000158043 103 ntBASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Gm26171-201ENSMUST00000158422 131 ntBASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Mir3066-201ENSMUST00000175296 83 ntBASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Mir6408-201ENSMUST00000183643 91 ntBASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Gm38050-201ENSMUST00000191904 238 ntBASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Gm18403-201ENSMUST00000192907 529 ntBASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Gm42453-201ENSMUST00000200477 409 ntBASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Gm45614-201ENSMUST00000209994 721 ntBASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ushbp1Q8R370 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC4.47□□□□□ -1.69
Ushbp1Q8R370 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.47□□□□□ -1.69
Ushbp1Q8R370 AC155929.1-201ENSMUST00000220217 1276 ntBASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.47□□□□□ -1.69
Ushbp1Q8R370 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Ushbp1Q8R370 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.46□□□□□ -1.69
Ushbp1Q8R370 Gm15095-201ENSMUST00000118996 1430 ntBASIC4.46□□□□□ -1.69
Ushbp1Q8R370 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Ushbp1Q8R370 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.46□□□□□ -1.69
Ushbp1Q8R370 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Ushbp1Q8R370 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
Ushbp1Q8R370 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ushbp1Q8R370 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Ushbp1Q8R370 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Ushbp1Q8R370 Gm26418-201ENSMUST00000104275 137 ntBASIC4.46□□□□□ -1.7
Ushbp1Q8R370 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC4.46□□□□□ -1.7
Ushbp1Q8R370 Gm12053-201ENSMUST00000119022 252 ntBASIC4.46□□□□□ -1.7
Ushbp1Q8R370 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.46□□□□□ -1.7
Ushbp1Q8R370 Gm16362-201ENSMUST00000135189 214 ntBASIC4.46□□□□□ -1.7
Ushbp1Q8R370 Gm23332-201ENSMUST00000157424 275 ntBASIC4.46□□□□□ -1.7
Ushbp1Q8R370 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ushbp1Q8R370 Gm20794-201ENSMUST00000177626 628 ntBASIC4.46□□□□□ -1.7
Ushbp1Q8R370 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Ushbp1Q8R370 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC4.46□□□□□ -1.7
Ushbp1Q8R370 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Ushbp1Q8R370 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC4.46□□□□□ -1.7
Ushbp1Q8R370 Gm44076-201ENSMUST00000203072 520 ntBASIC4.46□□□□□ -1.7
Ushbp1Q8R370 Gm44274-201ENSMUST00000203417 256 ntBASIC4.46□□□□□ -1.7
Ushbp1Q8R370 Gm44295-201ENSMUST00000203805 437 ntBASIC4.46□□□□□ -1.7
Ushbp1Q8R370 Gm44654-201ENSMUST00000208052 329 ntBASIC4.46□□□□□ -1.7
Ushbp1Q8R370 Gm18696-201ENSMUST00000220103 274 ntBASIC4.46□□□□□ -1.7
Ushbp1Q8R370 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.46□□□□□ -1.7
Ushbp1Q8R370 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.46□□□□□ -1.7
Ushbp1Q8R370 AC117202.2-201ENSMUST00000226491 1101 ntBASIC4.46□□□□□ -1.7
Ushbp1Q8R370 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ushbp1Q8R370 Gm7099-201ENSMUST00000080066 554 ntBASIC4.46□□□□□ -1.7
Ushbp1Q8R370 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Ushbp1Q8R370 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.46□□□□□ -1.7
Ushbp1Q8R370 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
Ushbp1Q8R370 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Gm23271-201ENSMUST00000104052 124 ntBASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Gm23744-201ENSMUST00000104231 149 ntBASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Gm22195-201ENSMUST00000116861 108 ntBASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Gm13331-201ENSMUST00000117500 448 ntBASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Gm12458-201ENSMUST00000119387 495 ntBASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Gm3788-201ENSMUST00000119949 136 ntBASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Gm11430-201ENSMUST00000121317 217 ntBASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Gm13368-201ENSMUST00000122443 430 ntBASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Gm24635-201ENSMUST00000122712 128 ntBASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Gm22059-201ENSMUST00000157544 104 ntBASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Gm25456-201ENSMUST00000157952 109 ntBASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Gm10357-201ENSMUST00000159886 264 ntBASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Gm26092-201ENSMUST00000179798 97 ntBASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Mir669a-1-201ENSMUST00000180238 97 ntBASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms