Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 AC137950.3-201ENSMUST00000228250 246 ntBASIC1.69□□□□□ -2.14
Col6a6Q8C6K9 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
Col6a6Q8C6K9 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Col6a6Q8C6K9 Gm43896-201ENSMUST00000203440 2032 ntBASIC1.68□□□□□ -2.14
Col6a6Q8C6K9 Gm9009-201ENSMUST00000117321 326 ntBASIC1.68□□□□□ -2.14
Col6a6Q8C6K9 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC1.68□□□□□ -2.14
Col6a6Q8C6K9 Mup-ps9-201ENSMUST00000178847 545 ntBASIC1.68□□□□□ -2.14
Col6a6Q8C6K9 Gm7909-201ENSMUST00000182688 614 ntBASIC1.68□□□□□ -2.14
Col6a6Q8C6K9 AC132260.2-201ENSMUST00000224482 344 ntBASIC1.68□□□□□ -2.14
Col6a6Q8C6K9 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Col6a6Q8C6K9 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Col6a6Q8C6K9 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC1.68□□□□□ -2.14
Col6a6Q8C6K9 Gm12509-201ENSMUST00000118033 609 ntBASIC1.68□□□□□ -2.14
Col6a6Q8C6K9 Gm11268-201ENSMUST00000118347 267 ntBASIC1.68□□□□□ -2.14
Col6a6Q8C6K9 Gm26354-201ENSMUST00000158221 129 ntBASIC1.68□□□□□ -2.14
Col6a6Q8C6K9 Mir8118-201ENSMUST00000183962 129 ntBASIC1.68□□□□□ -2.14
Col6a6Q8C6K9 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC1.68□□□□□ -2.14
Col6a6Q8C6K9 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.68□□□□□ -2.14
Col6a6Q8C6K9 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Col6a6Q8C6K9 AC239878.1-201ENSMUST00000224212 506 ntBASIC1.68□□□□□ -2.14
Col6a6Q8C6K9 AC129202.2-201ENSMUST00000225123 177 ntBASIC1.68□□□□□ -2.14
Col6a6Q8C6K9 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Col6a6Q8C6K9 Gm44897-201ENSMUST00000206187 1341 ntBASIC1.67□□□□□ -2.14
Col6a6Q8C6K9 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Col6a6Q8C6K9 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.67□□□□□ -2.14
Col6a6Q8C6K9 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.67□□□□□ -2.14
Col6a6Q8C6K9 Gm8292-201ENSMUST00000162574 396 ntBASIC1.67□□□□□ -2.14
Col6a6Q8C6K9 Mir8119-201ENSMUST00000183371 129 ntBASIC1.67□□□□□ -2.14
Col6a6Q8C6K9 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Col6a6Q8C6K9 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Col6a6Q8C6K9 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Col6a6Q8C6K9 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Col6a6Q8C6K9 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Col6a6Q8C6K9 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Col6a6Q8C6K9 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Col6a6Q8C6K9 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Col6a6Q8C6K9 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Col6a6Q8C6K9 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Col6a6Q8C6K9 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Col6a6Q8C6K9 Gm37692-201ENSMUST00000192633 232 ntBASIC1.67□□□□□ -2.14
Col6a6Q8C6K9 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Col6a6Q8C6K9 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC1.67□□□□□ -2.14
Col6a6Q8C6K9 AC122484.1-201ENSMUST00000221578 177 ntBASIC1.67□□□□□ -2.14
Col6a6Q8C6K9 AC159263.3-201ENSMUST00000223434 460 ntBASIC1.67□□□□□ -2.14
Col6a6Q8C6K9 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC1.67□□□□□ -2.14
Col6a6Q8C6K9 Gm22304-201ENSMUST00000082688 129 ntBASIC1.67□□□□□ -2.14
Col6a6Q8C6K9 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC1.67□□□□□ -2.14
Col6a6Q8C6K9 Gm7209-201ENSMUST00000122339 333 ntBASIC1.66□□□□□ -2.14
Col6a6Q8C6K9 Gm29552-201ENSMUST00000190548 660 ntBASIC1.66□□□□□ -2.14
Col6a6Q8C6K9 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC1.66□□□□□ -2.14
Col6a6Q8C6K9 Gm9375-201ENSMUST00000208899 903 ntBASIC1.66□□□□□ -2.14
Col6a6Q8C6K9 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC1.66□□□□□ -2.14
Col6a6Q8C6K9 AC141642.1-201ENSMUST00000220598 229 ntBASIC1.66□□□□□ -2.14
Col6a6Q8C6K9 AC107369.1-201ENSMUST00000227373 860 ntBASIC1.66□□□□□ -2.14
Col6a6Q8C6K9 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
Col6a6Q8C6K9 Gm42448-201ENSMUST00000197122 2644 ntBASIC1.66□□□□□ -2.14
Col6a6Q8C6K9 BC022960-201ENSMUST00000119987 1815 ntBASIC1.66□□□□□ -2.14
Col6a6Q8C6K9 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Col6a6Q8C6K9 Gm26396-201ENSMUST00000104093 132 ntBASIC1.66□□□□□ -2.14
Col6a6Q8C6K9 Gm15148-201ENSMUST00000117602 156 ntBASIC1.66□□□□□ -2.14
Col6a6Q8C6K9 Gm16510-201ENSMUST00000153501 249 ntBASIC1.66□□□□□ -2.14
Col6a6Q8C6K9 Gm23642-201ENSMUST00000157858 258 ntBASIC1.66□□□□□ -2.14
Col6a6Q8C6K9 Mir7059-201ENSMUST00000184825 59 ntBASIC1.66□□□□□ -2.14
Col6a6Q8C6K9 Gm18727-201ENSMUST00000185981 553 ntBASIC1.66□□□□□ -2.14
Col6a6Q8C6K9 AC129308.2-201ENSMUST00000224588 789 ntBASIC1.66□□□□□ -2.14
Col6a6Q8C6K9 Gm24044-201ENSMUST00000083107 156 ntBASIC1.66□□□□□ -2.14
Col6a6Q8C6K9 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Col6a6Q8C6K9 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Col6a6Q8C6K9 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
Col6a6Q8C6K9 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Col6a6Q8C6K9 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
Col6a6Q8C6K9 Gm14588-201ENSMUST00000119895 172 ntBASIC1.65□□□□□ -2.14
Col6a6Q8C6K9 Gm19791-201ENSMUST00000180398 859 ntBASIC1.65□□□□□ -2.14
Col6a6Q8C6K9 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC1.65□□□□□ -2.14
Col6a6Q8C6K9 Gm18540-201ENSMUST00000204025 526 ntBASIC1.65□□□□□ -2.14
Col6a6Q8C6K9 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC1.65□□□□□ -2.14
Col6a6Q8C6K9 Gm3690-201ENSMUST00000211341 262 ntBASIC1.65□□□□□ -2.14
Col6a6Q8C6K9 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.65□□□□□ -2.14
Col6a6Q8C6K9 AC192088.2-201ENSMUST00000227590 411 ntBASIC1.65□□□□□ -2.14
Col6a6Q8C6K9 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
Col6a6Q8C6K9 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC1.65□□□□□ -2.15
Col6a6Q8C6K9 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Col6a6Q8C6K9 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
Col6a6Q8C6K9 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Col6a6Q8C6K9 Gm44821-201ENSMUST00000208212 2002 ntBASIC1.65□□□□□ -2.15
Col6a6Q8C6K9 Gm22761-201ENSMUST00000102278 96 ntBASIC1.65□□□□□ -2.15
Col6a6Q8C6K9 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC1.65□□□□□ -2.15
Col6a6Q8C6K9 Gm44011-201ENSMUST00000203336 394 ntBASIC1.65□□□□□ -2.15
Col6a6Q8C6K9 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Col6a6Q8C6K9 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Col6a6Q8C6K9 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Col6a6Q8C6K9 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC1.64□□□□□ -2.15
Col6a6Q8C6K9 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC1.64□□□□□ -2.15
Col6a6Q8C6K9 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Col6a6Q8C6K9 Mir301b-201ENSMUST00000102333 97 ntBASIC1.64□□□□□ -2.15
Col6a6Q8C6K9 Gm16100-201ENSMUST00000120489 231 ntBASIC1.64□□□□□ -2.15
Col6a6Q8C6K9 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC1.64□□□□□ -2.15
Col6a6Q8C6K9 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Col6a6Q8C6K9 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Col6a6Q8C6K9 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms