Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm28098-201ENSMUST00000191361 699 ntBASIC5.28□□□□□ -1.56
Usp40Q8BWR4 Gm36984-201ENSMUST00000192770 235 ntBASIC5.28□□□□□ -1.56
Usp40Q8BWR4 Gm18551-201ENSMUST00000195594 642 ntBASIC5.28□□□□□ -1.56
Usp40Q8BWR4 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC5.28□□□□□ -1.56
Usp40Q8BWR4 Gm45365-201ENSMUST00000209489 256 ntBASIC5.28□□□□□ -1.56
Usp40Q8BWR4 AC167013.2-202ENSMUST00000227035 333 ntBASIC5.28□□□□□ -1.56
Usp40Q8BWR4 AC134577.1-201ENSMUST00000227572 295 ntBASIC5.28□□□□□ -1.56
Usp40Q8BWR4 AC131029.2-202ENSMUST00000228430 496 ntBASIC5.28□□□□□ -1.56
Usp40Q8BWR4 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Usp40Q8BWR4 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Usp40Q8BWR4 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Usp40Q8BWR4 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Usp40Q8BWR4 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Usp40Q8BWR4 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Usp40Q8BWR4 Gm43718-201ENSMUST00000197524 1857 ntBASIC5.28□□□□□ -1.56
Usp40Q8BWR4 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Usp40Q8BWR4 Gm37345-201ENSMUST00000193062 3138 ntBASIC5.28□□□□□ -1.56
Usp40Q8BWR4 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Usp40Q8BWR4 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Usp40Q8BWR4 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Gm44283-201ENSMUST00000204461 3950 ntBASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Gm37652-201ENSMUST00000195290 2095 ntBASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Mir466h-201ENSMUST00000104748 81 ntBASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Gm13510-201ENSMUST00000118659 429 ntBASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Gm23258-201ENSMUST00000158319 106 ntBASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Gm37625-201ENSMUST00000194969 4872 ntBASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Gm42539-201ENSMUST00000197009 308 ntBASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Gm45023-201ENSMUST00000207951 379 ntBASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Gm6303-201ENSMUST00000210123 471 ntBASIC5.27□□□□□ -1.57
Usp40Q8BWR4 AC152415.1-201ENSMUST00000213320 440 ntBASIC5.27□□□□□ -1.57
Usp40Q8BWR4 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Gm4263-202ENSMUST00000221392 667 ntBASIC5.27□□□□□ -1.57
Usp40Q8BWR4 AC126554.1-201ENSMUST00000222161 271 ntBASIC5.27□□□□□ -1.57
Usp40Q8BWR4 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Usp40Q8BWR4 AC166369.1-201ENSMUST00000228126 351 ntBASIC5.27□□□□□ -1.57
Usp40Q8BWR4 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.27□□□□□ -1.57
Usp40Q8BWR4 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Gm35755-201ENSMUST00000222392 2077 ntBASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Gm38065-201ENSMUST00000193147 3492 ntBASIC5.27□□□□□ -1.57
Usp40Q8BWR4 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Gm43201-201ENSMUST00000195925 3416 ntBASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Gm13355-201ENSMUST00000117996 317 ntBASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Gm14428-201ENSMUST00000120408 822 ntBASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Gm14876-201ENSMUST00000120795 327 ntBASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Gm25784-201ENSMUST00000122524 81 ntBASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Gm29704-201ENSMUST00000196011 253 ntBASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Gm42428-201ENSMUST00000198677 302 ntBASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Gm43914-201ENSMUST00000203592 594 ntBASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Gm45049-201ENSMUST00000207586 591 ntBASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Gm44938-201ENSMUST00000208614 427 ntBASIC5.26□□□□□ -1.57
Usp40Q8BWR4 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.26□□□□□ -1.57
Usp40Q8BWR4 AC132465.3-201ENSMUST00000219326 195 ntBASIC5.26□□□□□ -1.57
Usp40Q8BWR4 AC091783.5-201ENSMUST00000224928 671 ntBASIC5.26□□□□□ -1.57
Usp40Q8BWR4 AC090496.1-201ENSMUST00000226020 260 ntBASIC5.26□□□□□ -1.57
Usp40Q8BWR4 AC141884.1-201ENSMUST00000226327 636 ntBASIC5.26□□□□□ -1.57
Usp40Q8BWR4 AC154467.1-201ENSMUST00000227527 449 ntBASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Gm25929-201ENSMUST00000082784 107 ntBASIC5.26□□□□□ -1.57
Usp40Q8BWR4 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Gm37777-201ENSMUST00000195546 3366 ntBASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Usp40Q8BWR4 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Usp40Q8BWR4 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms