Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC5.08□□□□□ -1.6
Trim56Q80VI1 AC154552.1-201ENSMUST00000222969 202 ntBASIC5.08□□□□□ -1.6
Trim56Q80VI1 AC137961.1-201ENSMUST00000227924 734 ntBASIC5.08□□□□□ -1.6
Trim56Q80VI1 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC5.08□□□□□ -1.6
Trim56Q80VI1 Gm29325-201ENSMUST00000190705 2528 ntBASIC5.08□□□□□ -1.6
Trim56Q80VI1 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Trim56Q80VI1 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Trim56Q80VI1 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trim56Q80VI1 Gm37642-201ENSMUST00000193166 1735 ntBASIC5.08□□□□□ -1.6
Trim56Q80VI1 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim56Q80VI1 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim56Q80VI1 Gm20345-201ENSMUST00000175839 2414 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim56Q80VI1 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim56Q80VI1 Gm42639-201ENSMUST00000197061 1871 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim56Q80VI1 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim56Q80VI1 Gm24338-201ENSMUST00000104205 127 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 Gm13664-201ENSMUST00000117304 345 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 Gm11432-201ENSMUST00000117334 231 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 Gm12568-201ENSMUST00000117362 624 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 Gm11576-201ENSMUST00000117433 417 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 Gm11398-201ENSMUST00000120330 320 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 Gm4916-201ENSMUST00000126139 642 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim56Q80VI1 Gm22037-201ENSMUST00000157280 296 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC5.07□□□□□ -1.6
Trim56Q80VI1 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim56Q80VI1 Mir6926-201ENSMUST00000184562 68 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 Gm32033-201ENSMUST00000193483 339 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 Gm43649-201ENSMUST00000196596 391 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC5.07□□□□□ -1.6
Trim56Q80VI1 Gm44419-201ENSMUST00000203338 229 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 Gm45150-201ENSMUST00000206051 467 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 Gm44825-201ENSMUST00000207557 150 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 Gm44598-201ENSMUST00000207566 150 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC5.07□□□□□ -1.6
Trim56Q80VI1 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Trim56Q80VI1 Gm33654-201ENSMUST00000221704 215 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 Gm21937-201ENSMUST00000222825 218 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 AC122397.2-201ENSMUST00000227422 686 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 Gm7117-201ENSMUST00000071515 387 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim56Q80VI1 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim56Q80VI1 Gm37329-201ENSMUST00000192973 2057 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim56Q80VI1 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim56Q80VI1 AC156025.1-201ENSMUST00000223597 3551 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 Gm14421-201ENSMUST00000121755 1958 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
Trim56Q80VI1 Gm45223-201ENSMUST00000207037 5138 ntBASIC5.07□□□□□ -1.6
Trim56Q80VI1 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim56Q80VI1 Gm15773-201ENSMUST00000118665 1448 ntBASIC5.06□□□□□ -1.6
Trim56Q80VI1 Gm37983-201ENSMUST00000193207 2006 ntBASIC5.06□□□□□ -1.6
Trim56Q80VI1 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim56Q80VI1 AC160931.3-201ENSMUST00000222111 2267 ntBASIC5.06□□□□□ -1.6
Trim56Q80VI1 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim56Q80VI1 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim56Q80VI1 Gm24125-201ENSMUST00000104105 137 ntBASIC5.06□□□□□ -1.6
Trim56Q80VI1 Gm14890-201ENSMUST00000117660 676 ntBASIC5.06□□□□□ -1.6
Trim56Q80VI1 Gm15994-201ENSMUST00000118029 402 ntBASIC5.06□□□□□ -1.6
Trim56Q80VI1 Gm14269-201ENSMUST00000120455 306 ntBASIC5.06□□□□□ -1.6
Trim56Q80VI1 Gm14008-201ENSMUST00000120483 274 ntBASIC5.06□□□□□ -1.6
Trim56Q80VI1 Gm23789-201ENSMUST00000122536 301 ntBASIC5.06□□□□□ -1.6
Trim56Q80VI1 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Trim56Q80VI1 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim56Q80VI1 Gm27579-201ENSMUST00000158113 63 ntBASIC5.06□□□□□ -1.6
Trim56Q80VI1 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Trim56Q80VI1 Gm26701-201ENSMUST00000181571 234 ntBASIC5.06□□□□□ -1.6
Trim56Q80VI1 Mir6960-201ENSMUST00000183449 61 ntBASIC5.06□□□□□ -1.6
Trim56Q80VI1 Gm19637-201ENSMUST00000185933 579 ntBASIC5.06□□□□□ -1.6
Trim56Q80VI1 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Trim56Q80VI1 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC5.06□□□□□ -1.6
Trim56Q80VI1 Gm37568-201ENSMUST00000191755 364 ntBASIC5.06□□□□□ -1.6
Trim56Q80VI1 Gm37338-201ENSMUST00000191986 127 ntBASIC5.06□□□□□ -1.6
Trim56Q80VI1 Gm38053-201ENSMUST00000193938 160 ntBASIC5.06□□□□□ -1.6
Trim56Q80VI1 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC5.06□□□□□ -1.6
Trim56Q80VI1 Mir5121-201ENSMUST00000198528 74 ntBASIC5.06□□□□□ -1.6
Trim56Q80VI1 Mir691-201ENSMUST00000199719 78 ntBASIC5.06□□□□□ -1.6
Trim56Q80VI1 Gm4045-201ENSMUST00000204076 310 ntBASIC5.06□□□□□ -1.6
Trim56Q80VI1 Gm20734-201ENSMUST00000216939 193 ntBASIC5.06□□□□□ -1.6
Trim56Q80VI1 Gm7540-201ENSMUST00000219764 926 ntBASIC5.06□□□□□ -1.6
Trim56Q80VI1 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC5.06□□□□□ -1.6
Trim56Q80VI1 AC154515.2-201ENSMUST00000226093 406 ntBASIC5.06□□□□□ -1.6
Trim56Q80VI1 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC5.06□□□□□ -1.6
Trim56Q80VI1 Gm11284-201ENSMUST00000121910 1887 ntBASIC5.06□□□□□ -1.6
Trim56Q80VI1 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim56Q80VI1 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim56Q80VI1 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim56Q80VI1 Gm38101-201ENSMUST00000193484 3557 ntBASIC5.06□□□□□ -1.6
Trim56Q80VI1 Gm43374-201ENSMUST00000202498 2391 ntBASIC5.06□□□□□ -1.6
Trim56Q80VI1 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Trim56Q80VI1 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim56Q80VI1 Gm45483-201ENSMUST00000209845 1682 ntBASIC5.05□□□□□ -1.6
Trim56Q80VI1 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trim56Q80VI1 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trim56Q80VI1 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 110.7 ms