Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm44438-201ENSMUST00000204388 3236 ntBASIC2.34□□□□□ -2.03
Nup98Q6PFD9 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
Nup98Q6PFD9 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Nup98Q6PFD9 Gm13627-201ENSMUST00000119700 706 ntBASIC2.34□□□□□ -2.03
Nup98Q6PFD9 Gm11404-201ENSMUST00000120872 494 ntBASIC2.34□□□□□ -2.03
Nup98Q6PFD9 Gm17929-201ENSMUST00000186851 627 ntBASIC2.34□□□□□ -2.03
Nup98Q6PFD9 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC2.34□□□□□ -2.03
Nup98Q6PFD9 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC2.34□□□□□ -2.03
Nup98Q6PFD9 Gm45367-201ENSMUST00000210171 347 ntBASIC2.34□□□□□ -2.03
Nup98Q6PFD9 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.34□□□□□ -2.03
Nup98Q6PFD9 Gm38265-201ENSMUST00000193479 3766 ntBASIC2.34□□□□□ -2.04
Nup98Q6PFD9 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Nup98Q6PFD9 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Nup98Q6PFD9 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
Nup98Q6PFD9 Gm12721-201ENSMUST00000120621 268 ntBASIC2.33□□□□□ -2.04
Nup98Q6PFD9 Gm13366-201ENSMUST00000122198 970 ntBASIC2.33□□□□□ -2.04
Nup98Q6PFD9 Gm18595-201ENSMUST00000175736 1068 ntBASIC2.33□□□□□ -2.04
Nup98Q6PFD9 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC2.33□□□□□ -2.04
Nup98Q6PFD9 Mir6352-201ENSMUST00000184495 116 ntBASIC2.33□□□□□ -2.04
Nup98Q6PFD9 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC2.33□□□□□ -2.04
Nup98Q6PFD9 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC2.33□□□□□ -2.04
Nup98Q6PFD9 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC2.33□□□□□ -2.04
Nup98Q6PFD9 AC173345.3-201ENSMUST00000221245 1093 ntBASIC2.33□□□□□ -2.04
Nup98Q6PFD9 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.33□□□□□ -2.04
Nup98Q6PFD9 AC154532.2-201ENSMUST00000228947 598 ntBASIC2.33□□□□□ -2.04
Nup98Q6PFD9 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Nup98Q6PFD9 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Nup98Q6PFD9 Gm25938-201ENSMUST00000104139 166 ntBASIC2.33□□□□□ -2.04
Nup98Q6PFD9 Gm25728-201ENSMUST00000104525 159 ntBASIC2.33□□□□□ -2.04
Nup98Q6PFD9 Gm12492-201ENSMUST00000117665 564 ntBASIC2.33□□□□□ -2.04
Nup98Q6PFD9 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.33□□□□□ -2.04
Nup98Q6PFD9 Gm25555-201ENSMUST00000158078 111 ntBASIC2.33□□□□□ -2.04
Nup98Q6PFD9 Ear-ps12-201ENSMUST00000161720 451 ntBASIC2.33□□□□□ -2.04
Nup98Q6PFD9 Gm28155-201ENSMUST00000191066 151 ntBASIC2.33□□□□□ -2.04
Nup98Q6PFD9 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC2.33□□□□□ -2.04
Nup98Q6PFD9 Gm44408-201ENSMUST00000200205 66 ntBASIC2.33□□□□□ -2.04
Nup98Q6PFD9 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC2.33□□□□□ -2.04
Nup98Q6PFD9 AC147615.1-201ENSMUST00000218914 441 ntBASIC2.33□□□□□ -2.04
Nup98Q6PFD9 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Nup98Q6PFD9 AC124433.2-201ENSMUST00000223867 291 ntBASIC2.33□□□□□ -2.04
Nup98Q6PFD9 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Nup98Q6PFD9 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.32□□□□□ -2.04
Nup98Q6PFD9 Mup-ps21-201ENSMUST00000119998 448 ntBASIC2.32□□□□□ -2.04
Nup98Q6PFD9 Gm22345-201ENSMUST00000122644 107 ntBASIC2.32□□□□□ -2.04
Nup98Q6PFD9 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC2.32□□□□□ -2.04
Nup98Q6PFD9 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC2.32□□□□□ -2.04
Nup98Q6PFD9 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.32□□□□□ -2.04
Nup98Q6PFD9 Gm22858-201ENSMUST00000174972 76 ntBASIC2.32□□□□□ -2.04
Nup98Q6PFD9 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC2.32□□□□□ -2.04
Nup98Q6PFD9 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC2.32□□□□□ -2.04
Nup98Q6PFD9 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC2.32□□□□□ -2.04
Nup98Q6PFD9 Gm6012-201ENSMUST00000210821 730 ntBASIC2.32□□□□□ -2.04
Nup98Q6PFD9 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.32□□□□□ -2.04
Nup98Q6PFD9 AC164629.4-201ENSMUST00000218505 3247 ntBASIC2.31□□□□□ -2.04
Nup98Q6PFD9 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.31□□□□□ -2.04
Nup98Q6PFD9 Gm15162-201ENSMUST00000119325 283 ntBASIC2.31□□□□□ -2.04
Nup98Q6PFD9 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.31□□□□□ -2.04
Nup98Q6PFD9 Mir7016-201ENSMUST00000184308 72 ntBASIC2.31□□□□□ -2.04
Nup98Q6PFD9 Mir6405-201ENSMUST00000184584 124 ntBASIC2.31□□□□□ -2.04
Nup98Q6PFD9 Gm45063-201ENSMUST00000203726 472 ntBASIC2.31□□□□□ -2.04
Nup98Q6PFD9 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Nup98Q6PFD9 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Nup98Q6PFD9 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC2.31□□□□□ -2.04
Nup98Q6PFD9 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Nup98Q6PFD9 Gm44897-201ENSMUST00000206187 1341 ntBASIC2.31□□□□□ -2.04
Nup98Q6PFD9 Gm9009-201ENSMUST00000117321 326 ntBASIC2.31□□□□□ -2.04
Nup98Q6PFD9 Gm11890-201ENSMUST00000119585 417 ntBASIC2.31□□□□□ -2.04
Nup98Q6PFD9 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.31□□□□□ -2.04
Nup98Q6PFD9 Gm9892-201ENSMUST00000182415 992 ntBASIC2.31□□□□□ -2.04
Nup98Q6PFD9 Olfr1055-202ENSMUST00000188023 939 ntBASIC2.31□□□□□ -2.04
Nup98Q6PFD9 Gm28745-201ENSMUST00000190069 305 ntBASIC2.31□□□□□ -2.04
Nup98Q6PFD9 Gm43239-201ENSMUST00000200131 201 ntBASIC2.31□□□□□ -2.04
Nup98Q6PFD9 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC2.31□□□□□ -2.04
Nup98Q6PFD9 Gm20039-201ENSMUST00000210329 394 ntBASIC2.31□□□□□ -2.04
Nup98Q6PFD9 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.31□□□□□ -2.04
Nup98Q6PFD9 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC2.31□□□□□ -2.04
Nup98Q6PFD9 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC2.31□□□□□ -2.04
Nup98Q6PFD9 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.31□□□□□ -2.04
Nup98Q6PFD9 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC2.31□□□□□ -2.04
Nup98Q6PFD9 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.31□□□□□ -2.04
Nup98Q6PFD9 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.31□□□□□ -2.04
Nup98Q6PFD9 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Nup98Q6PFD9 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
Nup98Q6PFD9 Gm43047-201ENSMUST00000200089 3460 ntBASIC2.3□□□□□ -2.04
Nup98Q6PFD9 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
Nup98Q6PFD9 Gm43718-201ENSMUST00000197524 1857 ntBASIC2.3□□□□□ -2.04
Nup98Q6PFD9 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC2.3□□□□□ -2.04
Nup98Q6PFD9 Gm11577-201ENSMUST00000118030 737 ntBASIC2.3□□□□□ -2.04
Nup98Q6PFD9 Gm24379-201ENSMUST00000122695 86 ntBASIC2.3□□□□□ -2.04
Nup98Q6PFD9 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.3□□□□□ -2.04
Nup98Q6PFD9 Gm24317-201ENSMUST00000178536 107 ntBASIC2.3□□□□□ -2.04
Nup98Q6PFD9 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Nup98Q6PFD9 AL772271.1-201ENSMUST00000196848 65 ntBASIC2.3□□□□□ -2.04
Nup98Q6PFD9 Gm5309-201ENSMUST00000197416 677 ntBASIC2.3□□□□□ -2.04
Nup98Q6PFD9 Gm43198-201ENSMUST00000200927 326 ntBASIC2.3□□□□□ -2.04
Nup98Q6PFD9 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Nup98Q6PFD9 AC073947.1-201ENSMUST00000216991 649 ntBASIC2.3□□□□□ -2.04
Nup98Q6PFD9 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Nup98Q6PFD9 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Nup98Q6PFD9 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 102.1 ms