Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Trim28Q62318 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Trim28Q62318 Gm5265-201ENSMUST00000076828 342 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Trim28Q62318 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Trim28Q62318 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Trim28Q62318 Snord35b-201ENSMUST00000082833 87 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 Gm25141-201ENSMUST00000083177 107 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 Gm25630-201ENSMUST00000084000 162 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 Gm10161-201ENSMUST00000091506 204 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Trim28Q62318 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Trim28Q62318 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Trim28Q62318 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Trim28Q62318 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Trim28Q62318 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Trim28Q62318 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC4.75□□□□□ -1.65
Trim28Q62318 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Trim28Q62318 Gm14594-201ENSMUST00000118052 537 ntBASIC4.75□□□□□ -1.65
Trim28Q62318 Gm13379-201ENSMUST00000118053 621 ntBASIC4.75□□□□□ -1.65
Trim28Q62318 Gm14590-201ENSMUST00000118934 537 ntBASIC4.75□□□□□ -1.65
Trim28Q62318 Gm6969-201ENSMUST00000140065 342 ntBASIC4.75□□□□□ -1.65
Trim28Q62318 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC4.75□□□□□ -1.65
Trim28Q62318 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC4.75□□□□□ -1.65
Trim28Q62318 Gm22380-201ENSMUST00000157479 95 ntBASIC4.75□□□□□ -1.65
Trim28Q62318 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC4.75□□□□□ -1.65
Trim28Q62318 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC4.75□□□□□ -1.65
Trim28Q62318 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Trim28Q62318 Gm14596-201ENSMUST00000180268 537 ntBASIC4.75□□□□□ -1.65
Trim28Q62318 Gm14595-201ENSMUST00000180335 537 ntBASIC4.75□□□□□ -1.65
Trim28Q62318 Gm27694-201ENSMUST00000184740 86 ntBASIC4.75□□□□□ -1.65
Trim28Q62318 Gm28257-201ENSMUST00000185244 463 ntBASIC4.75□□□□□ -1.65
Trim28Q62318 Gm20162-201ENSMUST00000193629 871 ntBASIC4.75□□□□□ -1.65
Trim28Q62318 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.75□□□□□ -1.65
Trim28Q62318 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC4.75□□□□□ -1.65
Trim28Q62318 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC4.75□□□□□ -1.65
Trim28Q62318 Gm45080-201ENSMUST00000206648 283 ntBASIC4.75□□□□□ -1.65
Trim28Q62318 Gm3442-201ENSMUST00000216808 710 ntBASIC4.75□□□□□ -1.65
Trim28Q62318 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Trim28Q62318 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Trim28Q62318 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.75□□□□□ -1.65
Trim28Q62318 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Trim28Q62318 Gm24446-201ENSMUST00000083982 156 ntBASIC4.75□□□□□ -1.65
Trim28Q62318 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC4.75□□□□□ -1.65
Trim28Q62318 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Trim28Q62318 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Trim28Q62318 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim28Q62318 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.75□□□□□ -1.65
Trim28Q62318 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
Trim28Q62318 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.74□□□□□ -1.65
Trim28Q62318 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim28Q62318 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.74□□□□□ -1.65
Trim28Q62318 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim28Q62318 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Trim28Q62318 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Trim28Q62318 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Trim28Q62318 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim28Q62318 Gm15951-201ENSMUST00000118377 400 ntBASIC4.74□□□□□ -1.65
Trim28Q62318 Gm14845-201ENSMUST00000121259 306 ntBASIC4.74□□□□□ -1.65
Trim28Q62318 Gm6079-201ENSMUST00000121356 404 ntBASIC4.74□□□□□ -1.65
Trim28Q62318 Defa-ps12-201ENSMUST00000122353 193 ntBASIC4.74□□□□□ -1.65
Trim28Q62318 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC4.74□□□□□ -1.65
Trim28Q62318 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim28Q62318 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC4.74□□□□□ -1.65
Trim28Q62318 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC4.74□□□□□ -1.65
Trim28Q62318 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC4.74□□□□□ -1.65
Trim28Q62318 Gm23775-201ENSMUST00000158991 249 ntBASIC4.74□□□□□ -1.65
Trim28Q62318 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim28Q62318 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC4.74□□□□□ -1.65
Trim28Q62318 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trim28Q62318 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trim28Q62318 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trim28Q62318 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trim28Q62318 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trim28Q62318 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trim28Q62318 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trim28Q62318 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trim28Q62318 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC4.74□□□□□ -1.65
Trim28Q62318 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC4.74□□□□□ -1.65
Trim28Q62318 Gm38080-201ENSMUST00000194035 268 ntBASIC4.74□□□□□ -1.65
Trim28Q62318 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC4.74□□□□□ -1.65
Trim28Q62318 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC4.74□□□□□ -1.65
Trim28Q62318 Gm44959-201ENSMUST00000209127 231 ntBASIC4.74□□□□□ -1.65
Trim28Q62318 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC4.74□□□□□ -1.65
Trim28Q62318 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.74□□□□□ -1.65
Trim28Q62318 AC153924.1-201ENSMUST00000220117 312 ntBASIC4.74□□□□□ -1.65
Trim28Q62318 Gm21007-201ENSMUST00000221024 326 ntBASIC4.74□□□□□ -1.65
Trim28Q62318 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim28Q62318 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.74□□□□□ -1.65
Trim28Q62318 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC4.74□□□□□ -1.65
Trim28Q62318 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim28Q62318 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trim28Q62318 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trim28Q62318 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim28Q62318 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim28Q62318 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.74□□□□□ -1.65
Trim28Q62318 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Trim28Q62318 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Trim28Q62318 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Trim28Q62318 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 111.4 ms