Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm37523-201ENSMUST00000194901 412 ntBASIC1.81□□□□□ -2.12
Trav6d-4Q5R1I0 Gm43070-201ENSMUST00000196938 415 ntBASIC1.81□□□□□ -2.12
Trav6d-4Q5R1I0 Gm44403-201ENSMUST00000198554 129 ntBASIC1.81□□□□□ -2.12
Trav6d-4Q5R1I0 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC1.81□□□□□ -2.12
Trav6d-4Q5R1I0 Gm45687-201ENSMUST00000209454 155 ntBASIC1.81□□□□□ -2.12
Trav6d-4Q5R1I0 Gm46146-201ENSMUST00000217483 346 ntBASIC1.81□□□□□ -2.12
Trav6d-4Q5R1I0 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC1.81□□□□□ -2.12
Trav6d-4Q5R1I0 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
Trav6d-4Q5R1I0 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trav6d-4Q5R1I0 Gm43540-201ENSMUST00000196320 3848 ntBASIC1.81□□□□□ -2.12
Trav6d-4Q5R1I0 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Trav6d-4Q5R1I0 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trav6d-4Q5R1I0 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trav6d-4Q5R1I0 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trav6d-4Q5R1I0 Gm11488-201ENSMUST00000117277 863 ntBASIC1.8□□□□□ -2.12
Trav6d-4Q5R1I0 Gm14907-201ENSMUST00000121948 854 ntBASIC1.8□□□□□ -2.12
Trav6d-4Q5R1I0 Gm15147-201ENSMUST00000122263 483 ntBASIC1.8□□□□□ -2.12
Trav6d-4Q5R1I0 Gm24237-201ENSMUST00000157790 132 ntBASIC1.8□□□□□ -2.12
Trav6d-4Q5R1I0 Gm22947-201ENSMUST00000158559 91 ntBASIC1.8□□□□□ -2.12
Trav6d-4Q5R1I0 Gm27233-201ENSMUST00000184030 307 ntBASIC1.8□□□□□ -2.12
Trav6d-4Q5R1I0 Mir6238-201ENSMUST00000184140 129 ntBASIC1.8□□□□□ -2.12
Trav6d-4Q5R1I0 Gm27959-201ENSMUST00000185172 111 ntBASIC1.8□□□□□ -2.12
Trav6d-4Q5R1I0 Gm37934-201ENSMUST00000192902 402 ntBASIC1.8□□□□□ -2.12
Trav6d-4Q5R1I0 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC1.8□□□□□ -2.12
Trav6d-4Q5R1I0 Gm43083-201ENSMUST00000199594 476 ntBASIC1.8□□□□□ -2.12
Trav6d-4Q5R1I0 Gm44348-201ENSMUST00000200165 122 ntBASIC1.8□□□□□ -2.12
Trav6d-4Q5R1I0 Gm45522-201ENSMUST00000210784 166 ntBASIC1.8□□□□□ -2.12
Trav6d-4Q5R1I0 AC155715.1-201ENSMUST00000213575 463 ntBASIC1.8□□□□□ -2.12
Trav6d-4Q5R1I0 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.8□□□□□ -2.12
Trav6d-4Q5R1I0 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC1.8□□□□□ -2.12
Trav6d-4Q5R1I0 Gm4263-202ENSMUST00000221392 667 ntBASIC1.8□□□□□ -2.12
Trav6d-4Q5R1I0 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC1.8□□□□□ -2.12
Trav6d-4Q5R1I0 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Trav6d-4Q5R1I0 Gm23096-201ENSMUST00000083447 107 ntBASIC1.8□□□□□ -2.12
Trav6d-4Q5R1I0 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC1.8□□□□□ -2.12
Trav6d-4Q5R1I0 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trav6d-4Q5R1I0 Gm18751-201ENSMUST00000185777 2013 ntBASIC1.79□□□□□ -2.12
Trav6d-4Q5R1I0 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Trav6d-4Q5R1I0 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
Trav6d-4Q5R1I0 Mir592-201ENSMUST00000102113 96 ntBASIC1.79□□□□□ -2.12
Trav6d-4Q5R1I0 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
Trav6d-4Q5R1I0 Gm14163-201ENSMUST00000117342 217 ntBASIC1.79□□□□□ -2.12
Trav6d-4Q5R1I0 Gm15936-201ENSMUST00000118706 460 ntBASIC1.79□□□□□ -2.12
Trav6d-4Q5R1I0 Gm13433-201ENSMUST00000121701 240 ntBASIC1.79□□□□□ -2.12
Trav6d-4Q5R1I0 Gm22561-201ENSMUST00000157331 84 ntBASIC1.79□□□□□ -2.12
Trav6d-4Q5R1I0 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC1.79□□□□□ -2.12
Trav6d-4Q5R1I0 Mir7050-201ENSMUST00000184636 60 ntBASIC1.79□□□□□ -2.12
Trav6d-4Q5R1I0 Gm37377-201ENSMUST00000191733 304 ntBASIC1.79□□□□□ -2.12
Trav6d-4Q5R1I0 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC1.79□□□□□ -2.12
Trav6d-4Q5R1I0 Gm19137-201ENSMUST00000213790 1164 ntBASIC1.79□□□□□ -2.12
Trav6d-4Q5R1I0 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
Trav6d-4Q5R1I0 AC132384.9-201ENSMUST00000218085 277 ntBASIC1.79□□□□□ -2.12
Trav6d-4Q5R1I0 Gm7540-201ENSMUST00000219764 926 ntBASIC1.79□□□□□ -2.12
Trav6d-4Q5R1I0 Gm5655-201ENSMUST00000221078 901 ntBASIC1.79□□□□□ -2.12
Trav6d-4Q5R1I0 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC1.79□□□□□ -2.12
Trav6d-4Q5R1I0 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Trav6d-4Q5R1I0 Mir222-201ENSMUST00000083537 79 ntBASIC1.79□□□□□ -2.12
Trav6d-4Q5R1I0 Gm45178-201ENSMUST00000207744 4110 ntBASIC1.78□□□□□ -2.12
Trav6d-4Q5R1I0 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Trav6d-4Q5R1I0 Gm25728-201ENSMUST00000104525 159 ntBASIC1.78□□□□□ -2.12
Trav6d-4Q5R1I0 Mir669d-201ENSMUST00000104644 121 ntBASIC1.78□□□□□ -2.12
Trav6d-4Q5R1I0 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC1.78□□□□□ -2.12
Trav6d-4Q5R1I0 Gm14771-201ENSMUST00000118249 203 ntBASIC1.78□□□□□ -2.12
Trav6d-4Q5R1I0 Gm23886-201ENSMUST00000122684 313 ntBASIC1.78□□□□□ -2.12
Trav6d-4Q5R1I0 Gm25392-201ENSMUST00000157335 297 ntBASIC1.78□□□□□ -2.12
Trav6d-4Q5R1I0 Mir5136-201ENSMUST00000175573 76 ntBASIC1.78□□□□□ -2.12
Trav6d-4Q5R1I0 Gm22264-201ENSMUST00000178200 107 ntBASIC1.78□□□□□ -2.12
Trav6d-4Q5R1I0 Gm20773-201ENSMUST00000178940 681 ntBASIC1.78□□□□□ -2.12
Trav6d-4Q5R1I0 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Trav6d-4Q5R1I0 Gm21147-201ENSMUST00000186046 913 ntBASIC1.78□□□□□ -2.12
Trav6d-4Q5R1I0 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC1.78□□□□□ -2.12
Trav6d-4Q5R1I0 Gm38214-201ENSMUST00000192581 988 ntBASIC1.78□□□□□ -2.12
Trav6d-4Q5R1I0 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC1.78□□□□□ -2.12
Trav6d-4Q5R1I0 Gm17890-201ENSMUST00000221419 757 ntBASIC1.78□□□□□ -2.12
Trav6d-4Q5R1I0 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Trav6d-4Q5R1I0 Gm24611-201ENSMUST00000083272 107 ntBASIC1.78□□□□□ -2.12
Trav6d-4Q5R1I0 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC1.78□□□□□ -2.12
Trav6d-4Q5R1I0 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Trav6d-4Q5R1I0 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC1.78□□□□□ -2.12
Trav6d-4Q5R1I0 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Trav6d-4Q5R1I0 Gm38278-201ENSMUST00000194715 1365 ntBASIC1.77□□□□□ -2.13
Trav6d-4Q5R1I0 Gm26077-201ENSMUST00000104064 123 ntBASIC1.77□□□□□ -2.13
Trav6d-4Q5R1I0 Gm24280-201ENSMUST00000104237 134 ntBASIC1.77□□□□□ -2.13
Trav6d-4Q5R1I0 Gm25526-201ENSMUST00000104332 132 ntBASIC1.77□□□□□ -2.13
Trav6d-4Q5R1I0 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC1.77□□□□□ -2.13
Trav6d-4Q5R1I0 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC1.77□□□□□ -2.13
Trav6d-4Q5R1I0 Gm12607-201ENSMUST00000120724 493 ntBASIC1.77□□□□□ -2.13
Trav6d-4Q5R1I0 Gm14736-201ENSMUST00000121470 336 ntBASIC1.77□□□□□ -2.13
Trav6d-4Q5R1I0 Gm5958-201ENSMUST00000147698 297 ntBASIC1.77□□□□□ -2.13
Trav6d-4Q5R1I0 Gm16510-201ENSMUST00000153501 249 ntBASIC1.77□□□□□ -2.13
Trav6d-4Q5R1I0 Gm22563-201ENSMUST00000157333 269 ntBASIC1.77□□□□□ -2.13
Trav6d-4Q5R1I0 Gm22083-201ENSMUST00000157586 102 ntBASIC1.77□□□□□ -2.13
Trav6d-4Q5R1I0 Gm22664-201ENSMUST00000158719 105 ntBASIC1.77□□□□□ -2.13
Trav6d-4Q5R1I0 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC1.77□□□□□ -2.13
Trav6d-4Q5R1I0 Gm8676-201ENSMUST00000184206 637 ntBASIC1.77□□□□□ -2.13
Trav6d-4Q5R1I0 Gm19641-201ENSMUST00000188432 417 ntBASIC1.77□□□□□ -2.13
Trav6d-4Q5R1I0 Nras-ps2-201ENSMUST00000195269 178 ntBASIC1.77□□□□□ -2.13
Trav6d-4Q5R1I0 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.77□□□□□ -2.13
Trav6d-4Q5R1I0 Mir3069-201ENSMUST00000198802 65 ntBASIC1.77□□□□□ -2.13
Trav6d-4Q5R1I0 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms