Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm29573-201ENSMUST00000190291 919 ntBASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm29740-201ENSMUST00000193182 655 ntBASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm6615-201ENSMUST00000199426 631 ntBASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 AC153899.1-201ENSMUST00000214092 1117 ntBASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Upf3bQ3ULL6 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Upf3bQ3ULL6 Gm12095-201ENSMUST00000121962 816 ntBASIC2.78□□□□□ -1.96
Upf3bQ3ULL6 Gm7209-201ENSMUST00000122339 333 ntBASIC2.78□□□□□ -1.96
Upf3bQ3ULL6 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC2.78□□□□□ -1.96
Upf3bQ3ULL6 Gm7346-201ENSMUST00000169661 476 ntBASIC2.78□□□□□ -1.96
Upf3bQ3ULL6 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.78□□□□□ -1.96
Upf3bQ3ULL6 Gm23415-201ENSMUST00000175519 83 ntBASIC2.78□□□□□ -1.96
Upf3bQ3ULL6 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.78□□□□□ -1.96
Upf3bQ3ULL6 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC2.78□□□□□ -1.96
Upf3bQ3ULL6 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Upf3bQ3ULL6 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.78□□□□□ -1.96
Upf3bQ3ULL6 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Upf3bQ3ULL6 Gm19498-201ENSMUST00000191128 331 ntBASIC2.78□□□□□ -1.96
Upf3bQ3ULL6 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC2.78□□□□□ -1.96
Upf3bQ3ULL6 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.78□□□□□ -1.96
Upf3bQ3ULL6 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.78□□□□□ -1.96
Upf3bQ3ULL6 Gm6030-201ENSMUST00000078768 402 ntBASIC2.78□□□□□ -1.96
Upf3bQ3ULL6 Gm24817-201ENSMUST00000093672 105 ntBASIC2.78□□□□□ -1.96
Upf3bQ3ULL6 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Upf3bQ3ULL6 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.97
Upf3bQ3ULL6 Gm45263-201ENSMUST00000210377 1375 ntBASIC2.77□□□□□ -1.97
Upf3bQ3ULL6 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Upf3bQ3ULL6 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Upf3bQ3ULL6 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Upf3bQ3ULL6 Gm25153-201ENSMUST00000157118 156 ntBASIC2.77□□□□□ -1.97
Upf3bQ3ULL6 Gm24691-201ENSMUST00000157762 140 ntBASIC2.77□□□□□ -1.97
Upf3bQ3ULL6 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.77□□□□□ -1.97
Upf3bQ3ULL6 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.77□□□□□ -1.97
Upf3bQ3ULL6 Gm20718-201ENSMUST00000176058 259 ntBASIC2.77□□□□□ -1.97
Upf3bQ3ULL6 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
Upf3bQ3ULL6 Gm37751-201ENSMUST00000192440 1198 ntBASIC2.77□□□□□ -1.97
Upf3bQ3ULL6 Ighv1-28-201ENSMUST00000192987 351 ntBASIC2.77□□□□□ -1.97
Upf3bQ3ULL6 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.77□□□□□ -1.97
Upf3bQ3ULL6 Gm43967-201ENSMUST00000203787 301 ntBASIC2.77□□□□□ -1.97
Upf3bQ3ULL6 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.77□□□□□ -1.97
Upf3bQ3ULL6 Gm18645-201ENSMUST00000209593 651 ntBASIC2.77□□□□□ -1.97
Upf3bQ3ULL6 Gm45452-201ENSMUST00000210905 177 ntBASIC2.77□□□□□ -1.97
Upf3bQ3ULL6 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC2.77□□□□□ -1.97
Upf3bQ3ULL6 AC121960.3-201ENSMUST00000227077 623 ntBASIC2.77□□□□□ -1.97
Upf3bQ3ULL6 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Upf3bQ3ULL6 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Upf3bQ3ULL6 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Upf3bQ3ULL6 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.77□□□□□ -1.97
Upf3bQ3ULL6 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Gm26341-201ENSMUST00000104561 134 ntBASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Mir466k-201ENSMUST00000116774 122 ntBASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Gm11598-201ENSMUST00000119257 357 ntBASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Upf3bQ3ULL6 Gm11575-201ENSMUST00000122243 228 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 114.9 ms