Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm25475-201ENSMUST00000082825 180 ntBASIC4.75□□□□□ -1.65
Rnf180Q3U827 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.75□□□□□ -1.65
Rnf180Q3U827 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Rnf180Q3U827 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Rnf180Q3U827 Gm4855-201ENSMUST00000192270 1967 ntBASIC4.74□□□□□ -1.65
Rnf180Q3U827 AC104897.1-201ENSMUST00000222638 3628 ntBASIC4.74□□□□□ -1.65
Rnf180Q3U827 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.74□□□□□ -1.65
Rnf180Q3U827 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Rnf180Q3U827 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.74□□□□□ -1.65
Rnf180Q3U827 Gm44894-201ENSMUST00000205280 2174 ntBASIC4.74□□□□□ -1.65
Rnf180Q3U827 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.74□□□□□ -1.65
Rnf180Q3U827 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Rnf180Q3U827 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Rnf180Q3U827 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Rnf180Q3U827 Gm13239-201ENSMUST00000119920 637 ntBASIC4.74□□□□□ -1.65
Rnf180Q3U827 Gm13852-201ENSMUST00000122350 242 ntBASIC4.74□□□□□ -1.65
Rnf180Q3U827 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.74□□□□□ -1.65
Rnf180Q3U827 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.74□□□□□ -1.65
Rnf180Q3U827 Gm23167-201ENSMUST00000157155 103 ntBASIC4.74□□□□□ -1.65
Rnf180Q3U827 Gm25666-201ENSMUST00000157702 107 ntBASIC4.74□□□□□ -1.65
Rnf180Q3U827 Gm25373-201ENSMUST00000158156 115 ntBASIC4.74□□□□□ -1.65
Rnf180Q3U827 Gm26141-201ENSMUST00000175299 126 ntBASIC4.74□□□□□ -1.65
Rnf180Q3U827 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Rnf180Q3U827 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Rnf180Q3U827 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Rnf180Q3U827 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Rnf180Q3U827 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Rnf180Q3U827 Gm29062-201ENSMUST00000186032 694 ntBASIC4.74□□□□□ -1.65
Rnf180Q3U827 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.74□□□□□ -1.65
Rnf180Q3U827 Gm29365-201ENSMUST00000189461 699 ntBASIC4.74□□□□□ -1.65
Rnf180Q3U827 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC4.74□□□□□ -1.65
Rnf180Q3U827 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC4.74□□□□□ -1.65
Rnf180Q3U827 Igkv15-97-201ENSMUST00000197637 339 ntBASIC4.74□□□□□ -1.65
Rnf180Q3U827 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC4.74□□□□□ -1.65
Rnf180Q3U827 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
Rnf180Q3U827 AC153141.1-201ENSMUST00000218636 501 ntBASIC4.74□□□□□ -1.65
Rnf180Q3U827 Gm5955-201ENSMUST00000222712 219 ntBASIC4.74□□□□□ -1.65
Rnf180Q3U827 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.74□□□□□ -1.65
Rnf180Q3U827 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.74□□□□□ -1.65
Rnf180Q3U827 AC117202.2-201ENSMUST00000226491 1101 ntBASIC4.74□□□□□ -1.65
Rnf180Q3U827 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.74□□□□□ -1.65
Rnf180Q3U827 n-R5s50-201ENSMUST00000083168 111 ntBASIC4.74□□□□□ -1.65
Rnf180Q3U827 Gm23345-201ENSMUST00000083817 150 ntBASIC4.74□□□□□ -1.65
Rnf180Q3U827 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Rnf180Q3U827 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Rnf180Q3U827 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Rnf180Q3U827 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.74□□□□□ -1.65
Rnf180Q3U827 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Rnf180Q3U827 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Rnf180Q3U827 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
Rnf180Q3U827 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Rnf180Q3U827 Gm44438-201ENSMUST00000204388 3236 ntBASIC4.73□□□□□ -1.65
Rnf180Q3U827 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Rnf180Q3U827 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Rnf180Q3U827 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Rnf180Q3U827 Gm26396-201ENSMUST00000104093 132 ntBASIC4.73□□□□□ -1.65
Rnf180Q3U827 Gm14987-201ENSMUST00000117820 676 ntBASIC4.73□□□□□ -1.65
Rnf180Q3U827 Gm12837-201ENSMUST00000120131 373 ntBASIC4.73□□□□□ -1.65
Rnf180Q3U827 Gm5123-201ENSMUST00000121905 837 ntBASIC4.73□□□□□ -1.65
Rnf180Q3U827 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Rnf180Q3U827 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Rnf180Q3U827 Gm5755-201ENSMUST00000152394 837 ntBASIC4.73□□□□□ -1.65
Rnf180Q3U827 Gm23602-201ENSMUST00000157258 132 ntBASIC4.73□□□□□ -1.65
Rnf180Q3U827 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
Rnf180Q3U827 Gm29134-201ENSMUST00000186579 126 ntBASIC4.73□□□□□ -1.65
Rnf180Q3U827 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
Rnf180Q3U827 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC4.73□□□□□ -1.65
Rnf180Q3U827 Gm28241-201ENSMUST00000190916 235 ntBASIC4.73□□□□□ -1.65
Rnf180Q3U827 Gm18011-201ENSMUST00000203717 565 ntBASIC4.73□□□□□ -1.65
Rnf180Q3U827 AC153532.2-201ENSMUST00000219753 3844 ntBASIC4.73□□□□□ -1.65
Rnf180Q3U827 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.73□□□□□ -1.65
Rnf180Q3U827 Gm24037-201ENSMUST00000082871 180 ntBASIC4.73□□□□□ -1.65
Rnf180Q3U827 Gm26056-201ENSMUST00000083043 104 ntBASIC4.73□□□□□ -1.65
Rnf180Q3U827 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Rnf180Q3U827 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.73□□□□□ -1.65
Rnf180Q3U827 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.73□□□□□ -1.65
Rnf180Q3U827 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.73□□□□□ -1.65
Rnf180Q3U827 Gm43032-201ENSMUST00000197967 3123 ntBASIC4.73□□□□□ -1.65
Rnf180Q3U827 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Rnf180Q3U827 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Rnf180Q3U827 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Rnf180Q3U827 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Rnf180Q3U827 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Rnf180Q3U827 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Rnf180Q3U827 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Rnf180Q3U827 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Rnf180Q3U827 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Rnf180Q3U827 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.72□□□□□ -1.65
Rnf180Q3U827 n-R5s31-201ENSMUST00000104162 110 ntBASIC4.72□□□□□ -1.65
Rnf180Q3U827 Gm11859-201ENSMUST00000118099 455 ntBASIC4.72□□□□□ -1.65
Rnf180Q3U827 Gm14804-201ENSMUST00000122322 508 ntBASIC4.72□□□□□ -1.65
Rnf180Q3U827 Gm23463-201ENSMUST00000122468 99 ntBASIC4.72□□□□□ -1.65
Rnf180Q3U827 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC4.72□□□□□ -1.65
Rnf180Q3U827 Gm25314-201ENSMUST00000178810 79 ntBASIC4.72□□□□□ -1.65
Rnf180Q3U827 Gm4076-201ENSMUST00000179230 965 ntBASIC4.72□□□□□ -1.65
Rnf180Q3U827 Gm21171-201ENSMUST00000180048 673 ntBASIC4.72□□□□□ -1.65
Rnf180Q3U827 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Rnf180Q3U827 Gm28016-201ENSMUST00000184594 196 ntBASIC4.72□□□□□ -1.65
Rnf180Q3U827 Gm29610-201ENSMUST00000187749 453 ntBASIC4.72□□□□□ -1.65
Rnf180Q3U827 Gm43649-201ENSMUST00000196596 391 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms