Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Gm28404-201ENSMUST00000190242 453 ntBASIC3.09□□□□□ -1.91
Ssbp4Q3U4B1 Gm17966-201ENSMUST00000193453 594 ntBASIC3.09□□□□□ -1.91
Ssbp4Q3U4B1 Gm38356-201ENSMUST00000194313 408 ntBASIC3.09□□□□□ -1.91
Ssbp4Q3U4B1 Gm19418-201ENSMUST00000197436 580 ntBASIC3.09□□□□□ -1.91
Ssbp4Q3U4B1 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
Ssbp4Q3U4B1 Gm18703-201ENSMUST00000215318 333 ntBASIC3.09□□□□□ -1.91
Ssbp4Q3U4B1 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.09□□□□□ -1.91
Ssbp4Q3U4B1 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.09□□□□□ -1.91
Ssbp4Q3U4B1 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.09□□□□□ -1.91
Ssbp4Q3U4B1 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.09□□□□□ -1.91
Ssbp4Q3U4B1 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC3.09□□□□□ -1.91
Ssbp4Q3U4B1 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.09□□□□□ -1.91
Ssbp4Q3U4B1 CT009711.3-201ENSMUST00000225882 250 ntBASIC3.09□□□□□ -1.91
Ssbp4Q3U4B1 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.09□□□□□ -1.91
Ssbp4Q3U4B1 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.09□□□□□ -1.91
Ssbp4Q3U4B1 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Ssbp4Q3U4B1 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Ssbp4Q3U4B1 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Ssbp4Q3U4B1 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.09□□□□□ -1.92
Ssbp4Q3U4B1 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.09□□□□□ -1.92
Ssbp4Q3U4B1 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Ssbp4Q3U4B1 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 AC115891.1-201ENSMUST00000215798 1755 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm14816-201ENSMUST00000117174 294 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm14669-201ENSMUST00000118841 250 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm12693-201ENSMUST00000121965 483 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm23755-201ENSMUST00000157578 343 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm22080-201ENSMUST00000157591 106 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm25706-201ENSMUST00000157828 247 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm24901-201ENSMUST00000158125 110 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm23583-201ENSMUST00000158533 289 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm22890-201ENSMUST00000158642 144 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm25369-201ENSMUST00000158848 132 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm25163-201ENSMUST00000158905 104 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Cfap61-214ENSMUST00000167179 183 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm25670-201ENSMUST00000178423 107 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm26239-201ENSMUST00000178842 107 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm21758-201ENSMUST00000179336 819 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm24267-201ENSMUST00000179841 107 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Mir6408-201ENSMUST00000183643 91 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm20832-201ENSMUST00000189076 665 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm28920-201ENSMUST00000189957 699 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm28337-201ENSMUST00000190425 666 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm31511-201ENSMUST00000193134 657 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm30638-201ENSMUST00000195570 656 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm36728-201ENSMUST00000195782 665 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm5552-201ENSMUST00000197149 515 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm2189-201ENSMUST00000201419 429 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm44909-201ENSMUST00000208756 165 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm18488-201ENSMUST00000215082 364 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm8274-201ENSMUST00000219820 463 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm17890-201ENSMUST00000221419 757 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 AC102291.2-201ENSMUST00000228083 367 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm24292-201ENSMUST00000082888 107 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm26206-201ENSMUST00000082908 110 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 AC163660.3-201ENSMUST00000224253 1563 ntBASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Ssbp4Q3U4B1 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Ssbp4Q3U4B1 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.07□□□□□ -1.92
Ssbp4Q3U4B1 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.07□□□□□ -1.92
Ssbp4Q3U4B1 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
Ssbp4Q3U4B1 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Ssbp4Q3U4B1 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Ssbp4Q3U4B1 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Ssbp4Q3U4B1 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
Ssbp4Q3U4B1 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Ssbp4Q3U4B1 Gm24403-201ENSMUST00000104616 130 ntBASIC3.07□□□□□ -1.92
Ssbp4Q3U4B1 Gm13803-201ENSMUST00000117547 489 ntBASIC3.07□□□□□ -1.92
Ssbp4Q3U4B1 Gm14159-201ENSMUST00000119832 451 ntBASIC3.07□□□□□ -1.92
Ssbp4Q3U4B1 Gm12515-201ENSMUST00000120116 361 ntBASIC3.07□□□□□ -1.92
Ssbp4Q3U4B1 Gm14362-201ENSMUST00000121679 273 ntBASIC3.07□□□□□ -1.92
Ssbp4Q3U4B1 Gm12276-201ENSMUST00000121709 301 ntBASIC3.07□□□□□ -1.92
Ssbp4Q3U4B1 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC3.07□□□□□ -1.92
Ssbp4Q3U4B1 Gm12095-201ENSMUST00000121962 816 ntBASIC3.07□□□□□ -1.92
Ssbp4Q3U4B1 Gm14366-201ENSMUST00000121970 730 ntBASIC3.07□□□□□ -1.92
Ssbp4Q3U4B1 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.07□□□□□ -1.92
Ssbp4Q3U4B1 Gm15254-201ENSMUST00000149567 273 ntBASIC3.07□□□□□ -1.92
Ssbp4Q3U4B1 Gm23326-201ENSMUST00000157419 105 ntBASIC3.07□□□□□ -1.92
Ssbp4Q3U4B1 Gm25977-201ENSMUST00000158697 85 ntBASIC3.07□□□□□ -1.92
Ssbp4Q3U4B1 Gm25365-201ENSMUST00000158852 121 ntBASIC3.07□□□□□ -1.92
Ssbp4Q3U4B1 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.07□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms