Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm29610-201ENSMUST00000187749 453 ntBASIC5.45□□□□□ -1.54
Col9a1Q05722 Gm28253-202ENSMUST00000187971 615 ntBASIC5.45□□□□□ -1.54
Col9a1Q05722 Gm28468-201ENSMUST00000188536 615 ntBASIC5.45□□□□□ -1.54
Col9a1Q05722 Gm28896-201ENSMUST00000188609 696 ntBASIC5.45□□□□□ -1.54
Col9a1Q05722 Gm29268-201ENSMUST00000188669 615 ntBASIC5.45□□□□□ -1.54
Col9a1Q05722 Gm29169-201ENSMUST00000189835 615 ntBASIC5.45□□□□□ -1.54
Col9a1Q05722 Gm37172-201ENSMUST00000191926 615 ntBASIC5.45□□□□□ -1.54
Col9a1Q05722 Gm17966-201ENSMUST00000193453 594 ntBASIC5.45□□□□□ -1.54
Col9a1Q05722 Gm38107-201ENSMUST00000194873 696 ntBASIC5.45□□□□□ -1.54
Col9a1Q05722 Gm44182-201ENSMUST00000204052 115 ntBASIC5.45□□□□□ -1.54
Col9a1Q05722 AC140254.1-201ENSMUST00000220063 331 ntBASIC5.45□□□□□ -1.54
Col9a1Q05722 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC5.45□□□□□ -1.54
Col9a1Q05722 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.45□□□□□ -1.54
Col9a1Q05722 mt-Tf-201ENSMUST00000082387 68 ntBASIC5.45□□□□□ -1.54
Col9a1Q05722 Gm23140-201ENSMUST00000082487 107 ntBASIC5.45□□□□□ -1.54
Col9a1Q05722 Gm23298-201ENSMUST00000083181 107 ntBASIC5.45□□□□□ -1.54
Col9a1Q05722 Gm24614-201ENSMUST00000083269 107 ntBASIC5.45□□□□□ -1.54
Col9a1Q05722 Gm22057-201ENSMUST00000083387 107 ntBASIC5.45□□□□□ -1.54
Col9a1Q05722 Gm25516-201ENSMUST00000083857 107 ntBASIC5.45□□□□□ -1.54
Col9a1Q05722 Gm23947-201ENSMUST00000093636 107 ntBASIC5.45□□□□□ -1.54
Col9a1Q05722 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Col9a1Q05722 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Col9a1Q05722 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Col9a1Q05722 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col9a1Q05722 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Col9a1Q05722 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col9a1Q05722 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
Col9a1Q05722 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col9a1Q05722 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC5.45□□□□□ -1.54
Col9a1Q05722 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Col9a1Q05722 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Col9a1Q05722 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Col9a1Q05722 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.44□□□□□ -1.54
Col9a1Q05722 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col9a1Q05722 Gm10845-202ENSMUST00000228217 3389 ntBASIC5.44□□□□□ -1.54
Col9a1Q05722 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col9a1Q05722 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Col9a1Q05722 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col9a1Q05722 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Col9a1Q05722 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Col9a1Q05722 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
Col9a1Q05722 Mir669b-201ENSMUST00000102172 97 ntBASIC5.44□□□□□ -1.54
Col9a1Q05722 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Col9a1Q05722 Gm23175-201ENSMUST00000104371 132 ntBASIC5.44□□□□□ -1.54
Col9a1Q05722 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
Col9a1Q05722 Gm11971-201ENSMUST00000117715 288 ntBASIC5.44□□□□□ -1.54
Col9a1Q05722 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC5.44□□□□□ -1.54
Col9a1Q05722 Gm23956-201ENSMUST00000157211 119 ntBASIC5.44□□□□□ -1.54
Col9a1Q05722 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Col9a1Q05722 Gm6240-201ENSMUST00000208014 473 ntBASIC5.44□□□□□ -1.54
Col9a1Q05722 Gm44594-201ENSMUST00000208982 407 ntBASIC5.44□□□□□ -1.54
Col9a1Q05722 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Col9a1Q05722 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC5.44□□□□□ -1.54
Col9a1Q05722 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC5.44□□□□□ -1.54
Col9a1Q05722 AC101945.3-201ENSMUST00000226568 153 ntBASIC5.44□□□□□ -1.54
Col9a1Q05722 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Col9a1Q05722 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col9a1Q05722 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col9a1Q05722 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col9a1Q05722 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col9a1Q05722 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.44□□□□□ -1.54
Col9a1Q05722 Gm9930-201ENSMUST00000066742 3151 ntBASIC5.44□□□□□ -1.54
Col9a1Q05722 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Col9a1Q05722 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Col9a1Q05722 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
Col9a1Q05722 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.44□□□□□ -1.54
Col9a1Q05722 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col9a1Q05722 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.44□□□□□ -1.54
Col9a1Q05722 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col9a1Q05722 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC5.44□□□□□ -1.54
Col9a1Q05722 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Col9a1Q05722 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Col9a1Q05722 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Col9a1Q05722 AC160028.2-201ENSMUST00000218937 2519 ntBASIC5.43□□□□□ -1.54
Col9a1Q05722 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Col9a1Q05722 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col9a1Q05722 Gm45662-201ENSMUST00000210054 2098 ntBASIC5.43□□□□□ -1.54
Col9a1Q05722 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Col9a1Q05722 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col9a1Q05722 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Col9a1Q05722 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Col9a1Q05722 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col9a1Q05722 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC5.43□□□□□ -1.54
Col9a1Q05722 Gm2830-201ENSMUST00000140330 385 ntBASIC5.43□□□□□ -1.54
Col9a1Q05722 Gm22943-201ENSMUST00000158564 76 ntBASIC5.43□□□□□ -1.54
Col9a1Q05722 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.43□□□□□ -1.54
Col9a1Q05722 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Col9a1Q05722 Gm45651-201ENSMUST00000210857 335 ntBASIC5.43□□□□□ -1.54
Col9a1Q05722 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.43□□□□□ -1.54
Col9a1Q05722 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC5.43□□□□□ -1.54
Col9a1Q05722 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC5.43□□□□□ -1.54
Col9a1Q05722 AC100209.2-201ENSMUST00000224461 451 ntBASIC5.43□□□□□ -1.54
Col9a1Q05722 Apoo-ps-201ENSMUST00000061241 586 ntBASIC5.43□□□□□ -1.54
Col9a1Q05722 Gm25651-201ENSMUST00000083782 119 ntBASIC5.43□□□□□ -1.54
Col9a1Q05722 Gm23795-201ENSMUST00000084006 137 ntBASIC5.43□□□□□ -1.54
Col9a1Q05722 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Col9a1Q05722 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Col9a1Q05722 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Col9a1Q05722 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Col9a1Q05722 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 114.4 ms