Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm24577-201ENSMUST00000158580 63 ntBASIC4.99□□□□□ -1.61
Col6a1Q04857 Gm22891-201ENSMUST00000158641 164 ntBASIC4.99□□□□□ -1.61
Col6a1Q04857 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col6a1Q04857 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.99□□□□□ -1.61
Col6a1Q04857 Gm20698-201ENSMUST00000175657 233 ntBASIC4.99□□□□□ -1.61
Col6a1Q04857 Gm22243-201ENSMUST00000178754 120 ntBASIC4.99□□□□□ -1.61
Col6a1Q04857 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.99□□□□□ -1.61
Col6a1Q04857 Gm19637-201ENSMUST00000185933 579 ntBASIC4.99□□□□□ -1.61
Col6a1Q04857 Gm28471-201ENSMUST00000185994 615 ntBASIC4.99□□□□□ -1.61
Col6a1Q04857 Gm37416-201ENSMUST00000193596 318 ntBASIC4.99□□□□□ -1.61
Col6a1Q04857 Gm44354-201ENSMUST00000196017 143 ntBASIC4.99□□□□□ -1.61
Col6a1Q04857 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a1Q04857 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.99□□□□□ -1.61
Col6a1Q04857 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a1Q04857 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col6a1Q04857 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.99□□□□□ -1.61
Col6a1Q04857 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a1Q04857 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Col6a1Q04857 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a1Q04857 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.98□□□□□ -1.61
Col6a1Q04857 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col6a1Q04857 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Col6a1Q04857 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.98□□□□□ -1.61
Col6a1Q04857 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col6a1Q04857 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
Col6a1Q04857 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Col6a1Q04857 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Col6a1Q04857 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
Col6a1Q04857 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a1Q04857 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Col6a1Q04857 Mir466h-201ENSMUST00000104748 81 ntBASIC4.98□□□□□ -1.61
Col6a1Q04857 Gm13321-201ENSMUST00000117101 400 ntBASIC4.98□□□□□ -1.61
Col6a1Q04857 Gm15148-201ENSMUST00000117602 156 ntBASIC4.98□□□□□ -1.61
Col6a1Q04857 Gm23121-201ENSMUST00000157653 173 ntBASIC4.98□□□□□ -1.61
Col6a1Q04857 Gm24224-201ENSMUST00000158828 258 ntBASIC4.98□□□□□ -1.61
Col6a1Q04857 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a1Q04857 Gm26400-201ENSMUST00000175012 85 ntBASIC4.98□□□□□ -1.61
Col6a1Q04857 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC4.98□□□□□ -1.61
Col6a1Q04857 Gm23725-201ENSMUST00000177876 107 ntBASIC4.98□□□□□ -1.61
Col6a1Q04857 Gm4761-201ENSMUST00000178086 582 ntBASIC4.98□□□□□ -1.61
Col6a1Q04857 Gm26622-201ENSMUST00000180520 298 ntBASIC4.98□□□□□ -1.61
Col6a1Q04857 Mir6355-201ENSMUST00000183687 106 ntBASIC4.98□□□□□ -1.61
Col6a1Q04857 Gm28163-201ENSMUST00000187099 325 ntBASIC4.98□□□□□ -1.61
Col6a1Q04857 Gm29665-201ENSMUST00000191457 528 ntBASIC4.98□□□□□ -1.61
Col6a1Q04857 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC4.98□□□□□ -1.61
Col6a1Q04857 Gm6112-201ENSMUST00000208037 629 ntBASIC4.98□□□□□ -1.61
Col6a1Q04857 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC4.98□□□□□ -1.61
Col6a1Q04857 AC160031.2-201ENSMUST00000218242 274 ntBASIC4.98□□□□□ -1.61
Col6a1Q04857 Mir99a-201ENSMUST00000083596 65 ntBASIC4.98□□□□□ -1.61
Col6a1Q04857 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a1Q04857 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a1Q04857 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col6a1Q04857 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a1Q04857 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.98□□□□□ -1.61
Col6a1Q04857 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col6a1Q04857 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a1Q04857 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col6a1Q04857 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Col6a1Q04857 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col6a1Q04857 Snord98-201ENSMUST00000116819 65 ntBASIC4.97□□□□□ -1.61
Col6a1Q04857 Gm12042-201ENSMUST00000120479 301 ntBASIC4.97□□□□□ -1.61
Col6a1Q04857 Gm14559-201ENSMUST00000121745 496 ntBASIC4.97□□□□□ -1.61
Col6a1Q04857 Gm13092-201ENSMUST00000136346 260 ntBASIC4.97□□□□□ -1.61
Col6a1Q04857 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC4.97□□□□□ -1.61
Col6a1Q04857 Gm6969-201ENSMUST00000140065 342 ntBASIC4.97□□□□□ -1.61
Col6a1Q04857 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC4.97□□□□□ -1.61
Col6a1Q04857 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC4.97□□□□□ -1.61
Col6a1Q04857 Gm26278-201ENSMUST00000157098 132 ntBASIC4.97□□□□□ -1.61
Col6a1Q04857 Gm23262-201ENSMUST00000158323 168 ntBASIC4.97□□□□□ -1.61
Col6a1Q04857 Gm29397-201ENSMUST00000185205 333 ntBASIC4.97□□□□□ -1.61
Col6a1Q04857 Gm28660-201ENSMUST00000186496 253 ntBASIC4.97□□□□□ -1.61
Col6a1Q04857 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC4.97□□□□□ -1.61
Col6a1Q04857 Gm19193-201ENSMUST00000190263 590 ntBASIC4.97□□□□□ -1.61
Col6a1Q04857 Gm29192-201ENSMUST00000190942 377 ntBASIC4.97□□□□□ -1.61
Col6a1Q04857 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC4.97□□□□□ -1.61
Col6a1Q04857 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.97□□□□□ -1.61
Col6a1Q04857 Gm45252-201ENSMUST00000211579 397 ntBASIC4.97□□□□□ -1.61
Col6a1Q04857 AC152979.1-201ENSMUST00000218214 289 ntBASIC4.97□□□□□ -1.61
Col6a1Q04857 Gm23721-201ENSMUST00000083005 107 ntBASIC4.97□□□□□ -1.61
Col6a1Q04857 Gm23645-201ENSMUST00000083228 108 ntBASIC4.97□□□□□ -1.61
Col6a1Q04857 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Col6a1Q04857 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a1Q04857 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a1Q04857 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a1Q04857 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Col6a1Q04857 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a1Q04857 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col6a1Q04857 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Col6a1Q04857 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a1Q04857 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a1Q04857 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a1Q04857 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4.97□□□□□ -1.61
Col6a1Q04857 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Col6a1Q04857 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.97□□□□□ -1.61
Col6a1Q04857 Gm43188-201ENSMUST00000200180 2160 ntBASIC4.97□□□□□ -1.61
Col6a1Q04857 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
Col6a1Q04857 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
Col6a1Q04857 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
Col6a1Q04857 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.96□□□□□ -1.61
Col6a1Q04857 Gm5362-201ENSMUST00000211968 3085 ntBASIC4.96□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms