Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SmoP56726 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
SmoP56726 Gm38069-201ENSMUST00000195360 2144 ntBASIC3.7□□□□□ -1.82
SmoP56726 Gm24544-201ENSMUST00000103862 110 ntBASIC3.7□□□□□ -1.82
SmoP56726 Gm23577-201ENSMUST00000103950 110 ntBASIC3.7□□□□□ -1.82
SmoP56726 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
SmoP56726 Gm24831-201ENSMUST00000116778 126 ntBASIC3.7□□□□□ -1.82
SmoP56726 Gm13614-201ENSMUST00000117306 503 ntBASIC3.7□□□□□ -1.82
SmoP56726 Gm14751-201ENSMUST00000117693 222 ntBASIC3.7□□□□□ -1.82
SmoP56726 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC3.7□□□□□ -1.82
SmoP56726 Gm12137-201ENSMUST00000119565 346 ntBASIC3.7□□□□□ -1.82
SmoP56726 Gm11512-201ENSMUST00000119669 663 ntBASIC3.7□□□□□ -1.82
SmoP56726 Gm15037-201ENSMUST00000120358 259 ntBASIC3.7□□□□□ -1.82
SmoP56726 Gm22890-201ENSMUST00000158642 144 ntBASIC3.7□□□□□ -1.82
SmoP56726 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.7□□□□□ -1.82
SmoP56726 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC3.7□□□□□ -1.82
SmoP56726 Mir6938-201ENSMUST00000184173 63 ntBASIC3.7□□□□□ -1.82
SmoP56726 Gm28623-201ENSMUST00000187219 192 ntBASIC3.7□□□□□ -1.82
SmoP56726 Gm37757-201ENSMUST00000193072 210 ntBASIC3.7□□□□□ -1.82
SmoP56726 Gm38088-201ENSMUST00000195829 241 ntBASIC3.7□□□□□ -1.82
SmoP56726 Gm29704-201ENSMUST00000196011 253 ntBASIC3.7□□□□□ -1.82
SmoP56726 Gm43405-201ENSMUST00000198642 337 ntBASIC3.7□□□□□ -1.82
SmoP56726 Gm34091-201ENSMUST00000200875 604 ntBASIC3.7□□□□□ -1.82
SmoP56726 Gm17906-201ENSMUST00000202480 901 ntBASIC3.7□□□□□ -1.82
SmoP56726 Gm43884-201ENSMUST00000204251 559 ntBASIC3.7□□□□□ -1.82
SmoP56726 Gm35876-201ENSMUST00000205044 459 ntBASIC3.7□□□□□ -1.82
SmoP56726 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC3.7□□□□□ -1.82
SmoP56726 Gm19219-201ENSMUST00000215863 724 ntBASIC3.7□□□□□ -1.82
SmoP56726 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.7□□□□□ -1.82
SmoP56726 AC157017.1-201ENSMUST00000220148 364 ntBASIC3.7□□□□□ -1.82
SmoP56726 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SmoP56726 Gm23736-201ENSMUST00000082553 75 ntBASIC3.7□□□□□ -1.82
SmoP56726 Gm22868-201ENSMUST00000083955 164 ntBASIC3.7□□□□□ -1.82
SmoP56726 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SmoP56726 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SmoP56726 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SmoP56726 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SmoP56726 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SmoP56726 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SmoP56726 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
SmoP56726 Gm43924-201ENSMUST00000204851 1736 ntBASIC3.7□□□□□ -1.82
SmoP56726 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SmoP56726 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SmoP56726 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SmoP56726 Gm11420-201ENSMUST00000120047 402 ntBASIC3.69□□□□□ -1.82
SmoP56726 Gm15112-201ENSMUST00000120152 860 ntBASIC3.69□□□□□ -1.82
SmoP56726 Gm14875-201ENSMUST00000120881 319 ntBASIC3.69□□□□□ -1.82
SmoP56726 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.69□□□□□ -1.82
SmoP56726 Gm17119-201ENSMUST00000163943 280 ntBASIC3.69□□□□□ -1.82
SmoP56726 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SmoP56726 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.69□□□□□ -1.82
SmoP56726 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SmoP56726 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.69□□□□□ -1.82
SmoP56726 Trbv8-201ENSMUST00000194020 285 ntBASIC3.69□□□□□ -1.82
SmoP56726 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.69□□□□□ -1.82
SmoP56726 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.69□□□□□ -1.82
SmoP56726 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.69□□□□□ -1.82
SmoP56726 Gm45327-201ENSMUST00000211612 565 ntBASIC3.69□□□□□ -1.82
SmoP56726 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SmoP56726 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC3.69□□□□□ -1.82
SmoP56726 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC3.69□□□□□ -1.82
SmoP56726 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.69□□□□□ -1.82
SmoP56726 AC131720.2-201ENSMUST00000220420 431 ntBASIC3.69□□□□□ -1.82
SmoP56726 Gm46312-201ENSMUST00000220961 420 ntBASIC3.69□□□□□ -1.82
SmoP56726 Gm35558-203ENSMUST00000222264 204 ntBASIC3.69□□□□□ -1.82
SmoP56726 CT025689.4-201ENSMUST00000225926 601 ntBASIC3.69□□□□□ -1.82
SmoP56726 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.69□□□□□ -1.82
SmoP56726 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SmoP56726 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SmoP56726 Gm25800-201ENSMUST00000082636 134 ntBASIC3.69□□□□□ -1.82
SmoP56726 Gm22508-201ENSMUST00000082772 110 ntBASIC3.69□□□□□ -1.82
SmoP56726 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SmoP56726 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SmoP56726 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SmoP56726 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
SmoP56726 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
SmoP56726 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
SmoP56726 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SmoP56726 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SmoP56726 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
SmoP56726 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SmoP56726 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
SmoP56726 Gm25727-201ENSMUST00000104522 131 ntBASIC3.68□□□□□ -1.82
SmoP56726 Gm14918-201ENSMUST00000118153 268 ntBASIC3.68□□□□□ -1.82
SmoP56726 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.68□□□□□ -1.82
SmoP56726 Gm13737-201ENSMUST00000119793 232 ntBASIC3.68□□□□□ -1.82
SmoP56726 Gm14049-201ENSMUST00000121009 636 ntBASIC3.68□□□□□ -1.82
SmoP56726 Mup-ps12-201ENSMUST00000126217 549 ntBASIC3.68□□□□□ -1.82
SmoP56726 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC3.68□□□□□ -1.82
SmoP56726 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.68□□□□□ -1.82
SmoP56726 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC3.68□□□□□ -1.82
SmoP56726 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SmoP56726 Gm37698-201ENSMUST00000192605 463 ntBASIC3.68□□□□□ -1.82
SmoP56726 Gm9722-201ENSMUST00000194568 802 ntBASIC3.68□□□□□ -1.82
SmoP56726 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.68□□□□□ -1.82
SmoP56726 Gm42818-201ENSMUST00000198869 987 ntBASIC3.68□□□□□ -1.82
SmoP56726 Gm8041-201ENSMUST00000199755 616 ntBASIC3.68□□□□□ -1.82
SmoP56726 Gm44294-201ENSMUST00000205090 728 ntBASIC3.68□□□□□ -1.82
SmoP56726 AC073947.3-201ENSMUST00000215576 766 ntBASIC3.68□□□□□ -1.82
SmoP56726 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 115.4 ms