Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC4.81□□□□□ -1.64
Sox1P53783 Gm22114-201ENSMUST00000177756 107 ntBASIC4.81□□□□□ -1.64
Sox1P53783 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC4.81□□□□□ -1.64
Sox1P53783 Gm27997-201ENSMUST00000184942 69 ntBASIC4.81□□□□□ -1.64
Sox1P53783 Gm28288-201ENSMUST00000191019 214 ntBASIC4.81□□□□□ -1.64
Sox1P53783 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC4.81□□□□□ -1.64
Sox1P53783 Gm37801-201ENSMUST00000194754 274 ntBASIC4.81□□□□□ -1.64
Sox1P53783 Gm18453-201ENSMUST00000208000 626 ntBASIC4.81□□□□□ -1.64
Sox1P53783 Gm3338-201ENSMUST00000220982 269 ntBASIC4.81□□□□□ -1.64
Sox1P53783 AC124772.1-201ENSMUST00000221325 151 ntBASIC4.81□□□□□ -1.64
Sox1P53783 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.81□□□□□ -1.64
Sox1P53783 AC130821.1-201ENSMUST00000221997 293 ntBASIC4.81□□□□□ -1.64
Sox1P53783 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sox1P53783 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Sox1P53783 Gm4987-201ENSMUST00000078326 408 ntBASIC4.81□□□□□ -1.64
Sox1P53783 Gm22571-201ENSMUST00000082984 70 ntBASIC4.81□□□□□ -1.64
Sox1P53783 Gm23677-201ENSMUST00000083156 104 ntBASIC4.81□□□□□ -1.64
Sox1P53783 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Sox1P53783 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sox1P53783 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Sox1P53783 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Sox1P53783 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Sox1P53783 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC4.81□□□□□ -1.64
Sox1P53783 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.81□□□□□ -1.64
Sox1P53783 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sox1P53783 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Sox1P53783 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
Sox1P53783 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.81□□□□□ -1.64
Sox1P53783 Gm15773-201ENSMUST00000118665 1448 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Sox1P53783 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sox1P53783 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sox1P53783 Gm43024-201ENSMUST00000196770 4352 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Sox1P53783 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Sox1P53783 Gm23142-201ENSMUST00000101848 105 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Gm26240-201ENSMUST00000101893 105 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Mir690-201ENSMUST00000102110 109 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sox1P53783 Gm14880-201ENSMUST00000117581 292 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Gm11935-201ENSMUST00000118608 399 ntBASIC4.8□□□□□ -1.64
Sox1P53783 AA413626-201ENSMUST00000121125 494 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Gm12413-201ENSMUST00000121508 312 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Gm12956-201ENSMUST00000122184 414 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Gm22804-201ENSMUST00000158052 101 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Gm22257-201ENSMUST00000158687 301 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Gm6374-201ENSMUST00000159051 788 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Ear-ps4-201ENSMUST00000166834 450 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Gm25197-201ENSMUST00000175516 126 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Gm26501-201ENSMUST00000178307 107 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Gm43855-201ENSMUST00000197462 507 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Gm44391-201ENSMUST00000198490 93 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Gm44463-201ENSMUST00000198895 137 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Gm44371-201ENSMUST00000204148 467 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Gm20039-201ENSMUST00000210329 394 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Gm45327-201ENSMUST00000211612 565 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC4.8□□□□□ -1.64
Sox1P53783 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sox1P53783 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Gm3086-202ENSMUST00000221248 310 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Sox1P53783 Gm26497-201ENSMUST00000083146 107 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Mir338-201ENSMUST00000083666 98 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Gm8074-201ENSMUST00000095071 252 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sox1P53783 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Sox1P53783 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Sox1P53783 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sox1P53783 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Sox1P53783 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Sox1P53783 Gm37244-201ENSMUST00000191748 1981 ntBASIC4.8□□□□□ -1.64
Sox1P53783 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Sox1P53783 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Sox1P53783 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Sox1P53783 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Sox1P53783 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.79□□□□□ -1.64
Sox1P53783 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Sox1P53783 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Sox1P53783 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Sox1P53783 Fam107b-209ENSMUST00000226435 3602 ntBASIC4.79□□□□□ -1.64
Sox1P53783 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sox1P53783 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Sox1P53783 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC4.79□□□□□ -1.64
Sox1P53783 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC4.79□□□□□ -1.64
Sox1P53783 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Sox1P53783 Gm26367-201ENSMUST00000104165 132 ntBASIC4.79□□□□□ -1.64
Sox1P53783 Gm22590-201ENSMUST00000104247 128 ntBASIC4.79□□□□□ -1.64
Sox1P53783 Gm22498-201ENSMUST00000104497 86 ntBASIC4.79□□□□□ -1.64
Sox1P53783 Gm25727-201ENSMUST00000104522 131 ntBASIC4.79□□□□□ -1.64
Sox1P53783 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.79□□□□□ -1.64
Sox1P53783 Gm15026-201ENSMUST00000119219 458 ntBASIC4.79□□□□□ -1.64
Sox1P53783 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.79□□□□□ -1.64
Sox1P53783 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Sox1P53783 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.79□□□□□ -1.64
Sox1P53783 Gm23000-201ENSMUST00000157083 139 ntBASIC4.79□□□□□ -1.64
Sox1P53783 Gm23855-201ENSMUST00000158377 135 ntBASIC4.79□□□□□ -1.64
Sox1P53783 Gm25264-201ENSMUST00000158519 117 ntBASIC4.79□□□□□ -1.64
Sox1P53783 Mir6537-201ENSMUST00000184150 110 ntBASIC4.79□□□□□ -1.64
Sox1P53783 Gm29062-201ENSMUST00000186032 694 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms