Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm23721-201ENSMUST00000083005 107 ntBASIC5.35□□□□□ -1.55
Rfx1P48377 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Rfx1P48377 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Rfx1P48377 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC5.35□□□□□ -1.55
Rfx1P48377 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Rfx1P48377 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Rfx1P48377 Gm45517-201ENSMUST00000209973 2468 ntBASIC5.35□□□□□ -1.55
Rfx1P48377 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC5.35□□□□□ -1.55
Rfx1P48377 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Rfx1P48377 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Rfx1P48377 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Rfx1P48377 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
Rfx1P48377 Mir105-201ENSMUST00000104655 80 ntBASIC5.34□□□□□ -1.55
Rfx1P48377 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Rfx1P48377 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Rfx1P48377 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.34□□□□□ -1.55
Rfx1P48377 Gm15206-201ENSMUST00000119143 454 ntBASIC5.34□□□□□ -1.55
Rfx1P48377 Gm14067-201ENSMUST00000119340 314 ntBASIC5.34□□□□□ -1.55
Rfx1P48377 Gm15106-201ENSMUST00000119691 821 ntBASIC5.34□□□□□ -1.55
Rfx1P48377 Gm23887-201ENSMUST00000122683 172 ntBASIC5.34□□□□□ -1.55
Rfx1P48377 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.34□□□□□ -1.55
Rfx1P48377 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC5.34□□□□□ -1.55
Rfx1P48377 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Rfx1P48377 Gm24774-201ENSMUST00000157384 134 ntBASIC5.34□□□□□ -1.55
Rfx1P48377 Gm26153-201ENSMUST00000157433 127 ntBASIC5.34□□□□□ -1.55
Rfx1P48377 Gm25341-201ENSMUST00000157461 268 ntBASIC5.34□□□□□ -1.55
Rfx1P48377 Gm22312-201ENSMUST00000158005 130 ntBASIC5.34□□□□□ -1.55
Rfx1P48377 Gm7909-201ENSMUST00000182688 614 ntBASIC5.34□□□□□ -1.55
Rfx1P48377 Gm27410-201ENSMUST00000183851 115 ntBASIC5.34□□□□□ -1.55
Rfx1P48377 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC5.34□□□□□ -1.55
Rfx1P48377 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.34□□□□□ -1.55
Rfx1P48377 Gm37616-201ENSMUST00000193974 322 ntBASIC5.34□□□□□ -1.55
Rfx1P48377 Gm43586-201ENSMUST00000195948 310 ntBASIC5.34□□□□□ -1.55
Rfx1P48377 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC5.34□□□□□ -1.55
Rfx1P48377 Gm45395-201ENSMUST00000209891 559 ntBASIC5.34□□□□□ -1.55
Rfx1P48377 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.34□□□□□ -1.55
Rfx1P48377 AC132384.5-201ENSMUST00000218562 226 ntBASIC5.34□□□□□ -1.55
Rfx1P48377 AC153961.2-201ENSMUST00000218877 164 ntBASIC5.34□□□□□ -1.55
Rfx1P48377 Gm18441-201ENSMUST00000223539 617 ntBASIC5.34□□□□□ -1.55
Rfx1P48377 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.34□□□□□ -1.55
Rfx1P48377 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Rfx1P48377 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Rfx1P48377 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Rfx1P48377 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Rfx1P48377 Gm38235-201ENSMUST00000194600 4952 ntBASIC5.34□□□□□ -1.56
Rfx1P48377 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Rfx1P48377 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC5.33□□□□□ -1.56
Rfx1P48377 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Rfx1P48377 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Rfx1P48377 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC5.33□□□□□ -1.56
Rfx1P48377 Gm38152-201ENSMUST00000195389 3566 ntBASIC5.33□□□□□ -1.56
Rfx1P48377 Gm13046-201ENSMUST00000117391 501 ntBASIC5.33□□□□□ -1.56
Rfx1P48377 Gm9850-201ENSMUST00000117916 227 ntBASIC5.33□□□□□ -1.56
Rfx1P48377 Gm11448-201ENSMUST00000120427 450 ntBASIC5.33□□□□□ -1.56
Rfx1P48377 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Rfx1P48377 Gm17086-201ENSMUST00000171346 484 ntBASIC5.33□□□□□ -1.56
Rfx1P48377 Gm23415-201ENSMUST00000175519 83 ntBASIC5.33□□□□□ -1.56
Rfx1P48377 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC5.33□□□□□ -1.56
Rfx1P48377 Gm37961-201ENSMUST00000192729 299 ntBASIC5.33□□□□□ -1.56
Rfx1P48377 Gm43828-201ENSMUST00000196890 639 ntBASIC5.33□□□□□ -1.56
Rfx1P48377 Gm40692-201ENSMUST00000220411 491 ntBASIC5.33□□□□□ -1.56
Rfx1P48377 Gm2710-201ENSMUST00000073196 603 ntBASIC5.33□□□□□ -1.56
Rfx1P48377 Mir215-201ENSMUST00000083628 112 ntBASIC5.33□□□□□ -1.56
Rfx1P48377 Gm24031-201ENSMUST00000083930 131 ntBASIC5.33□□□□□ -1.56
Rfx1P48377 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC5.33□□□□□ -1.56
Rfx1P48377 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Rfx1P48377 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Rfx1P48377 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Rfx1P48377 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Rfx1P48377 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Rfx1P48377 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Rfx1P48377 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Rfx1P48377 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Rfx1P48377 Gm38069-201ENSMUST00000195360 2144 ntBASIC5.32□□□□□ -1.56
Rfx1P48377 Mir466b-8-201ENSMUST00000103883 86 ntBASIC5.32□□□□□ -1.56
Rfx1P48377 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC5.32□□□□□ -1.56
Rfx1P48377 Gm15058-201ENSMUST00000117689 458 ntBASIC5.32□□□□□ -1.56
Rfx1P48377 Gm13153-201ENSMUST00000120969 637 ntBASIC5.32□□□□□ -1.56
Rfx1P48377 Gm5353-201ENSMUST00000139800 793 ntBASIC5.32□□□□□ -1.56
Rfx1P48377 Gm24751-201ENSMUST00000157844 102 ntBASIC5.32□□□□□ -1.56
Rfx1P48377 Gm20534-201ENSMUST00000172957 172 ntBASIC5.32□□□□□ -1.56
Rfx1P48377 Gm4761-201ENSMUST00000178086 582 ntBASIC5.32□□□□□ -1.56
Rfx1P48377 Gm27245-201ENSMUST00000184385 376 ntBASIC5.32□□□□□ -1.56
Rfx1P48377 Gm28629-201ENSMUST00000187309 263 ntBASIC5.32□□□□□ -1.56
Rfx1P48377 Gm43510-201ENSMUST00000197922 353 ntBASIC5.32□□□□□ -1.56
Rfx1P48377 Gm43739-201ENSMUST00000198294 307 ntBASIC5.32□□□□□ -1.56
Rfx1P48377 Mir466e-201ENSMUST00000198862 84 ntBASIC5.32□□□□□ -1.56
Rfx1P48377 Gm44330-201ENSMUST00000200106 143 ntBASIC5.32□□□□□ -1.56
Rfx1P48377 Mir466c-1-201ENSMUST00000200654 84 ntBASIC5.32□□□□□ -1.56
Rfx1P48377 Gm43914-201ENSMUST00000203592 594 ntBASIC5.32□□□□□ -1.56
Rfx1P48377 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC5.32□□□□□ -1.56
Rfx1P48377 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC5.32□□□□□ -1.56
Rfx1P48377 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC5.32□□□□□ -1.56
Rfx1P48377 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Rfx1P48377 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Rfx1P48377 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Rfx1P48377 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Rfx1P48377 Svet1-201ENSMUST00000209370 3940 ntBASIC5.32□□□□□ -1.56
Rfx1P48377 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.32□□□□□ -1.56
Rfx1P48377 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms