Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm18360-201ENSMUST00000173327 1524 ntBASIC4.12□□□□□ -1.75
LdlrP35951 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
LdlrP35951 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.12□□□□□ -1.75
LdlrP35951 Gm22269-201ENSMUST00000104002 130 ntBASIC4.12□□□□□ -1.75
LdlrP35951 Gm26367-201ENSMUST00000104165 132 ntBASIC4.12□□□□□ -1.75
LdlrP35951 Gm23226-201ENSMUST00000116927 103 ntBASIC4.12□□□□□ -1.75
LdlrP35951 Gm12261-201ENSMUST00000117499 645 ntBASIC4.12□□□□□ -1.75
LdlrP35951 Gm13550-201ENSMUST00000118185 525 ntBASIC4.12□□□□□ -1.75
LdlrP35951 Gm13478-201ENSMUST00000118312 413 ntBASIC4.12□□□□□ -1.75
LdlrP35951 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.12□□□□□ -1.75
LdlrP35951 Gm25966-201ENSMUST00000157169 117 ntBASIC4.12□□□□□ -1.75
LdlrP35951 Gm25058-201ENSMUST00000157365 128 ntBASIC4.12□□□□□ -1.75
LdlrP35951 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LdlrP35951 Gm21991-201ENSMUST00000180006 508 ntBASIC4.12□□□□□ -1.75
LdlrP35951 Gm24415-201ENSMUST00000180218 107 ntBASIC4.12□□□□□ -1.75
LdlrP35951 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
LdlrP35951 Gm42832-201ENSMUST00000196361 745 ntBASIC4.12□□□□□ -1.75
LdlrP35951 Gm43405-201ENSMUST00000198642 337 ntBASIC4.12□□□□□ -1.75
LdlrP35951 Gm45614-201ENSMUST00000209994 721 ntBASIC4.12□□□□□ -1.75
LdlrP35951 Gm17989-201ENSMUST00000211543 412 ntBASIC4.12□□□□□ -1.75
LdlrP35951 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.12□□□□□ -1.75
LdlrP35951 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
LdlrP35951 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.12□□□□□ -1.75
LdlrP35951 AC154271.1-201ENSMUST00000224780 383 ntBASIC4.12□□□□□ -1.75
LdlrP35951 AC154358.1-201ENSMUST00000224871 218 ntBASIC4.12□□□□□ -1.75
LdlrP35951 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LdlrP35951 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LdlrP35951 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
LdlrP35951 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.12□□□□□ -1.75
LdlrP35951 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
LdlrP35951 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.12□□□□□ -1.75
LdlrP35951 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
LdlrP35951 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
LdlrP35951 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.12□□□□□ -1.75
LdlrP35951 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.12□□□□□ -1.75
LdlrP35951 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
LdlrP35951 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LdlrP35951 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
LdlrP35951 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LdlrP35951 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
LdlrP35951 Gm13567-201ENSMUST00000118026 247 ntBASIC4.11□□□□□ -1.75
LdlrP35951 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.11□□□□□ -1.75
LdlrP35951 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.11□□□□□ -1.75
LdlrP35951 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC4.11□□□□□ -1.75
LdlrP35951 Gm24441-201ENSMUST00000157235 281 ntBASIC4.11□□□□□ -1.75
LdlrP35951 Gm25386-201ENSMUST00000157814 288 ntBASIC4.11□□□□□ -1.75
LdlrP35951 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC4.11□□□□□ -1.75
LdlrP35951 Gm21960-201ENSMUST00000181924 452 ntBASIC4.11□□□□□ -1.75
LdlrP35951 Gm27694-201ENSMUST00000184740 86 ntBASIC4.11□□□□□ -1.75
LdlrP35951 Gm28872-201ENSMUST00000191518 158 ntBASIC4.11□□□□□ -1.75
LdlrP35951 Gm38270-201ENSMUST00000192721 407 ntBASIC4.11□□□□□ -1.75
LdlrP35951 Gm43649-201ENSMUST00000196596 391 ntBASIC4.11□□□□□ -1.75
LdlrP35951 Gm19202-201ENSMUST00000198096 808 ntBASIC4.11□□□□□ -1.75
LdlrP35951 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.11□□□□□ -1.75
LdlrP35951 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC4.11□□□□□ -1.75
LdlrP35951 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC4.11□□□□□ -1.75
LdlrP35951 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.11□□□□□ -1.75
LdlrP35951 AC170600.1-201ENSMUST00000228763 277 ntBASIC4.11□□□□□ -1.75
LdlrP35951 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
LdlrP35951 Gm10042-201ENSMUST00000079884 78 ntBASIC4.11□□□□□ -1.75
LdlrP35951 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.11□□□□□ -1.75
LdlrP35951 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LdlrP35951 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.11□□□□□ -1.75
LdlrP35951 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.11□□□□□ -1.75
LdlrP35951 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LdlrP35951 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
LdlrP35951 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
LdlrP35951 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
LdlrP35951 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LdlrP35951 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
LdlrP35951 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
LdlrP35951 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
LdlrP35951 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LdlrP35951 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
LdlrP35951 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
LdlrP35951 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
LdlrP35951 Gm24792-201ENSMUST00000104286 128 ntBASIC4.1□□□□□ -1.75
LdlrP35951 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LdlrP35951 Gm5379-201ENSMUST00000120973 826 ntBASIC4.1□□□□□ -1.75
LdlrP35951 Gm11229-201ENSMUST00000121993 437 ntBASIC4.1□□□□□ -1.75
LdlrP35951 Gm22986-201ENSMUST00000122753 130 ntBASIC4.1□□□□□ -1.75
LdlrP35951 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LdlrP35951 Gm26348-201ENSMUST00000157528 240 ntBASIC4.1□□□□□ -1.75
LdlrP35951 Gm23078-201ENSMUST00000157848 148 ntBASIC4.1□□□□□ -1.75
LdlrP35951 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC4.1□□□□□ -1.75
LdlrP35951 Mir5099-201ENSMUST00000175257 74 ntBASIC4.1□□□□□ -1.75
LdlrP35951 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.1□□□□□ -1.75
LdlrP35951 Gm27490-201ENSMUST00000184754 128 ntBASIC4.1□□□□□ -1.75
LdlrP35951 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
LdlrP35951 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.1□□□□□ -1.75
LdlrP35951 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC4.1□□□□□ -1.75
LdlrP35951 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC4.1□□□□□ -1.75
LdlrP35951 Gm37817-201ENSMUST00000195276 434 ntBASIC4.1□□□□□ -1.75
LdlrP35951 Gm36954-201ENSMUST00000195362 363 ntBASIC4.1□□□□□ -1.75
LdlrP35951 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC4.1□□□□□ -1.75
LdlrP35951 Gm18854-201ENSMUST00000211196 329 ntBASIC4.1□□□□□ -1.75
LdlrP35951 Gm25401-201ENSMUST00000082975 106 ntBASIC4.1□□□□□ -1.75
LdlrP35951 Gm26128-201ENSMUST00000083170 110 ntBASIC4.1□□□□□ -1.75
LdlrP35951 Gm6361-201ENSMUST00000091031 435 ntBASIC4.1□□□□□ -1.75
LdlrP35951 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms