Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm20542-201ENSMUST00000174582 372 ntBASIC2.8□□□□□ -1.96
Col2a1P28481 Gm29475-201ENSMUST00000190767 312 ntBASIC2.8□□□□□ -1.96
Col2a1P28481 Gm37098-201ENSMUST00000192290 244 ntBASIC2.8□□□□□ -1.96
Col2a1P28481 Gm17935-201ENSMUST00000196649 772 ntBASIC2.8□□□□□ -1.96
Col2a1P28481 Gm44060-201ENSMUST00000204440 410 ntBASIC2.8□□□□□ -1.96
Col2a1P28481 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Col2a1P28481 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC2.8□□□□□ -1.96
Col2a1P28481 AC160016.1-201ENSMUST00000215589 448 ntBASIC2.8□□□□□ -1.96
Col2a1P28481 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.8□□□□□ -1.96
Col2a1P28481 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Col2a1P28481 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.8□□□□□ -1.96
Col2a1P28481 Gm25131-201ENSMUST00000082653 151 ntBASIC2.8□□□□□ -1.96
Col2a1P28481 Gm25636-201ENSMUST00000082666 133 ntBASIC2.8□□□□□ -1.96
Col2a1P28481 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC2.8□□□□□ -1.96
Col2a1P28481 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Col2a1P28481 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
Col2a1P28481 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Col2a1P28481 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.8□□□□□ -1.96
Col2a1P28481 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Col2a1P28481 Gm2348-201ENSMUST00000108782 300 ntBASIC2.79□□□□□ -1.96
Col2a1P28481 Gm15854-201ENSMUST00000118879 808 ntBASIC2.79□□□□□ -1.96
Col2a1P28481 Gm14913-201ENSMUST00000120011 1093 ntBASIC2.79□□□□□ -1.96
Col2a1P28481 Gm11835-201ENSMUST00000120635 663 ntBASIC2.79□□□□□ -1.96
Col2a1P28481 Gm13471-201ENSMUST00000122057 433 ntBASIC2.79□□□□□ -1.96
Col2a1P28481 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.79□□□□□ -1.96
Col2a1P28481 Gm24210-201ENSMUST00000158263 133 ntBASIC2.79□□□□□ -1.96
Col2a1P28481 Mir3106-201ENSMUST00000175401 82 ntBASIC2.79□□□□□ -1.96
Col2a1P28481 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC2.79□□□□□ -1.96
Col2a1P28481 Gm19224-201ENSMUST00000190477 793 ntBASIC2.79□□□□□ -1.96
Col2a1P28481 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC2.79□□□□□ -1.96
Col2a1P28481 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Col2a1P28481 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Col2a1P28481 AC151843.1-201ENSMUST00000215960 691 ntBASIC2.79□□□□□ -1.96
Col2a1P28481 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC2.79□□□□□ -1.96
Col2a1P28481 AC141884.1-201ENSMUST00000226327 636 ntBASIC2.79□□□□□ -1.96
Col2a1P28481 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.79□□□□□ -1.96
Col2a1P28481 CT572983.1-201ENSMUST00000226895 514 ntBASIC2.79□□□□□ -1.96
Col2a1P28481 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Col2a1P28481 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Col2a1P28481 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
Col2a1P28481 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Col2a1P28481 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.79□□□□□ -1.96
Col2a1P28481 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Col2a1P28481 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Col2a1P28481 Gm23472-201ENSMUST00000101806 191 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Gm23551-201ENSMUST00000116852 121 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Gm13755-201ENSMUST00000118509 305 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Gm2003-201ENSMUST00000118537 636 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Defa-ps1-201ENSMUST00000119062 282 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Gm14986-201ENSMUST00000121262 1002 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Defa-ps6-201ENSMUST00000122172 282 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Gm1989-201ENSMUST00000126244 636 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Gm23600-201ENSMUST00000157260 71 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Col2a1P28481 Gm17061-201ENSMUST00000163167 499 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
Col2a1P28481 Gm18397-201ENSMUST00000176704 587 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Gm24497-201ENSMUST00000177868 191 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Gm25939-201ENSMUST00000179876 191 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Gm21991-201ENSMUST00000180006 508 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Gm26622-201ENSMUST00000180520 298 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Gm29552-201ENSMUST00000190548 660 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Gm37578-201ENSMUST00000192256 1177 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.78□□□□□ -1.96
Col2a1P28481 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Gm18327-201ENSMUST00000202426 830 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
Col2a1P28481 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Gm18892-201ENSMUST00000217628 881 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 AC154329.2-201ENSMUST00000225257 383 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 AC124729.1-202ENSMUST00000225587 938 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 AC167013.2-202ENSMUST00000227035 333 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Col2a1P28481 Gm6030-201ENSMUST00000078768 402 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Gm23628-201ENSMUST00000082464 173 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Gm23444-201ENSMUST00000082922 191 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Mir410-201ENSMUST00000083563 81 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
Col2a1P28481 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Col2a1P28481 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.78□□□□□ -1.96
Col2a1P28481 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.97
Col2a1P28481 Gm26377-201ENSMUST00000102184 108 ntBASIC2.77□□□□□ -1.97
Col2a1P28481 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Col2a1P28481 Gm5384-201ENSMUST00000120313 463 ntBASIC2.77□□□□□ -1.97
Col2a1P28481 Gm15244-201ENSMUST00000121122 130 ntBASIC2.77□□□□□ -1.97
Col2a1P28481 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.77□□□□□ -1.97
Col2a1P28481 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.77□□□□□ -1.97
Col2a1P28481 Gm23205-201ENSMUST00000158671 103 ntBASIC2.77□□□□□ -1.97
Col2a1P28481 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Col2a1P28481 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC2.77□□□□□ -1.97
Col2a1P28481 Gm9696-202ENSMUST00000191541 830 ntBASIC2.77□□□□□ -1.97
Col2a1P28481 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC2.77□□□□□ -1.97
Col2a1P28481 Gm4528-201ENSMUST00000207905 551 ntBASIC2.77□□□□□ -1.97
Col2a1P28481 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC2.77□□□□□ -1.97
Col2a1P28481 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Col2a1P28481 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.77□□□□□ -1.97
Col2a1P28481 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC2.77□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms