Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Sdc1P18828 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Sdc1P18828 Gm22676-201ENSMUST00000116972 129 ntBASIC2.42□□□□□ -2.02
Sdc1P18828 Gm14751-201ENSMUST00000117693 222 ntBASIC2.42□□□□□ -2.02
Sdc1P18828 Gm14681-201ENSMUST00000118047 411 ntBASIC2.42□□□□□ -2.02
Sdc1P18828 Gm6923-201ENSMUST00000118343 406 ntBASIC2.42□□□□□ -2.02
Sdc1P18828 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC2.42□□□□□ -2.02
Sdc1P18828 Gm14901-201ENSMUST00000119001 283 ntBASIC2.42□□□□□ -2.02
Sdc1P18828 Gm12042-201ENSMUST00000120479 301 ntBASIC2.42□□□□□ -2.02
Sdc1P18828 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.42□□□□□ -2.02
Sdc1P18828 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.42□□□□□ -2.02
Sdc1P18828 Gm12095-201ENSMUST00000121962 816 ntBASIC2.42□□□□□ -2.02
Sdc1P18828 Gm7209-201ENSMUST00000122339 333 ntBASIC2.42□□□□□ -2.02
Sdc1P18828 Gm26254-201ENSMUST00000122491 118 ntBASIC2.42□□□□□ -2.02
Sdc1P18828 Ang-ps2-201ENSMUST00000178173 433 ntBASIC2.42□□□□□ -2.02
Sdc1P18828 Gm6900-201ENSMUST00000178971 342 ntBASIC2.42□□□□□ -2.02
Sdc1P18828 Mir6963-201ENSMUST00000183535 71 ntBASIC2.42□□□□□ -2.02
Sdc1P18828 Mir6541-201ENSMUST00000183649 110 ntBASIC2.42□□□□□ -2.02
Sdc1P18828 Mir8118-201ENSMUST00000183962 129 ntBASIC2.42□□□□□ -2.02
Sdc1P18828 Gm19257-201ENSMUST00000186121 183 ntBASIC2.42□□□□□ -2.02
Sdc1P18828 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC2.42□□□□□ -2.02
Sdc1P18828 Gm43521-201ENSMUST00000197838 255 ntBASIC2.42□□□□□ -2.02
Sdc1P18828 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC2.42□□□□□ -2.02
Sdc1P18828 Gm43107-201ENSMUST00000198729 255 ntBASIC2.42□□□□□ -2.02
Sdc1P18828 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Sdc1P18828 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC2.42□□□□□ -2.02
Sdc1P18828 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC2.42□□□□□ -2.02
Sdc1P18828 Gm19709-201ENSMUST00000215403 482 ntBASIC2.42□□□□□ -2.02
Sdc1P18828 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC2.42□□□□□ -2.02
Sdc1P18828 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.42□□□□□ -2.02
Sdc1P18828 Mir184-201ENSMUST00000083662 69 ntBASIC2.42□□□□□ -2.02
Sdc1P18828 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Sdc1P18828 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
Sdc1P18828 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.42□□□□□ -2.02
Sdc1P18828 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Sdc1P18828 AC104897.1-201ENSMUST00000222638 3628 ntBASIC2.42□□□□□ -2.02
Sdc1P18828 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
Sdc1P18828 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Sdc1P18828 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Sdc1P18828 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Sdc1P18828 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 Gm24581-201ENSMUST00000103962 133 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 Gm26341-201ENSMUST00000104561 134 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 Gm13085-201ENSMUST00000118356 171 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 Gm15103-201ENSMUST00000119893 871 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 Gm14989-201ENSMUST00000120497 207 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.41□□□□□ -2.02
Sdc1P18828 Gm23755-201ENSMUST00000157578 343 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 Gm26088-201ENSMUST00000157896 131 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 Mir6371-201ENSMUST00000184470 111 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 Mir6943-201ENSMUST00000185186 66 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 Gm29641-201ENSMUST00000188955 259 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 Gm6801-201ENSMUST00000190697 339 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 Gm37007-201ENSMUST00000194234 319 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 Gm37987-201ENSMUST00000194999 825 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC2.41□□□□□ -2.02
Sdc1P18828 Gm19202-201ENSMUST00000198096 808 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC2.41□□□□□ -2.02
Sdc1P18828 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC2.41□□□□□ -2.02
Sdc1P18828 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 Gm18116-201ENSMUST00000220920 537 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.41□□□□□ -2.02
Sdc1P18828 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC2.41□□□□□ -2.02
Sdc1P18828 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 AC147633.1-201ENSMUST00000225134 259 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 Gm12582-201ENSMUST00000030555 697 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 Gm4945-201ENSMUST00000075152 453 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 Gm23723-201ENSMUST00000082996 132 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.41□□□□□ -2.02
Sdc1P18828 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Sdc1P18828 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Sdc1P18828 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Sdc1P18828 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.4□□□□□ -2.02
Sdc1P18828 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.02
Sdc1P18828 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.4□□□□□ -2.03
Sdc1P18828 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Sdc1P18828 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm26504-201ENSMUST00000102033 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm23948-201ENSMUST00000104030 132 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm14982-201ENSMUST00000121102 442 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm12155-201ENSMUST00000121267 160 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm22204-201ENSMUST00000122654 327 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm16533-201ENSMUST00000140035 228 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm25334-201ENSMUST00000158036 110 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Sdc1P18828 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Sdc1P18828 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.4□□□□□ -2.03
Sdc1P18828 Gm26502-201ENSMUST00000177732 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Snord116l13-201ENSMUST00000177737 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Gm25350-201ENSMUST00000177849 94 ntBASIC2.4□□□□□ -2.03
Sdc1P18828 Snord116l15-201ENSMUST00000177940 94 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms