Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm9931-201ENSMUST00000193584 1185 ntBASIC2.55□□□□□ -2
Cdx1P18111 Gm42832-201ENSMUST00000196361 745 ntBASIC2.55□□□□□ -2
Cdx1P18111 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.55□□□□□ -2
Cdx1P18111 Gm42828-201ENSMUST00000199669 469 ntBASIC2.55□□□□□ -2
Cdx1P18111 Gm44800-201ENSMUST00000207510 1855 ntBASIC2.55□□□□□ -2
Cdx1P18111 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.55□□□□□ -2
Cdx1P18111 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Cdx1P18111 AC069561.3-201ENSMUST00000217321 114 ntBASIC2.55□□□□□ -2
Cdx1P18111 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC2.55□□□□□ -2
Cdx1P18111 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC2.55□□□□□ -2
Cdx1P18111 AC124489.2-201ENSMUST00000223930 589 ntBASIC2.55□□□□□ -2
Cdx1P18111 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Cdx1P18111 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Cdx1P18111 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC2.55□□□□□ -2
Cdx1P18111 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.55□□□□□ -2
Cdx1P18111 Gm22043-201ENSMUST00000082993 158 ntBASIC2.55□□□□□ -2
Cdx1P18111 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
Cdx1P18111 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Cdx1P18111 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cdx1P18111 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Cdx1P18111 AC161254.1-201ENSMUST00000220310 3842 ntBASIC2.54□□□□□ -2
Cdx1P18111 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Cdx1P18111 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Cdx1P18111 Gm14973-201ENSMUST00000117248 255 ntBASIC2.54□□□□□ -2
Cdx1P18111 Gm11490-201ENSMUST00000118128 272 ntBASIC2.54□□□□□ -2
Cdx1P18111 Gm9440-201ENSMUST00000119667 539 ntBASIC2.54□□□□□ -2
Cdx1P18111 Gm12706-201ENSMUST00000121588 698 ntBASIC2.54□□□□□ -2
Cdx1P18111 Snrpert-201ENSMUST00000121967 279 ntBASIC2.54□□□□□ -2
Cdx1P18111 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC2.54□□□□□ -2
Cdx1P18111 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC2.54□□□□□ -2
Cdx1P18111 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.54□□□□□ -2
Cdx1P18111 Gm22560-201ENSMUST00000157332 120 ntBASIC2.54□□□□□ -2
Cdx1P18111 Gm3104-201ENSMUST00000171004 473 ntBASIC2.54□□□□□ -2
Cdx1P18111 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC2.54□□□□□ -2
Cdx1P18111 Mup-ps7-201ENSMUST00000178292 545 ntBASIC2.54□□□□□ -2
Cdx1P18111 Mup-ps8-201ENSMUST00000178663 545 ntBASIC2.54□□□□□ -2
Cdx1P18111 Mup-ps9-201ENSMUST00000178847 545 ntBASIC2.54□□□□□ -2
Cdx1P18111 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC2.54□□□□□ -2
Cdx1P18111 Mup-ps6-201ENSMUST00000179564 545 ntBASIC2.54□□□□□ -2
Cdx1P18111 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC2.54□□□□□ -2
Cdx1P18111 Gm27964-201ENSMUST00000185195 62 ntBASIC2.54□□□□□ -2
Cdx1P18111 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC2.54□□□□□ -2
Cdx1P18111 Gm37005-201ENSMUST00000193281 1164 ntBASIC2.54□□□□□ -2
Cdx1P18111 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.54□□□□□ -2
Cdx1P18111 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.54□□□□□ -2
Cdx1P18111 Gm43901-201ENSMUST00000203247 453 ntBASIC2.54□□□□□ -2
Cdx1P18111 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.54□□□□□ -2
Cdx1P18111 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cdx1P18111 Gm45049-201ENSMUST00000207586 591 ntBASIC2.54□□□□□ -2
Cdx1P18111 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.54□□□□□ -2
Cdx1P18111 Gm45288-201ENSMUST00000210236 151 ntBASIC2.54□□□□□ -2
Cdx1P18111 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.54□□□□□ -2
Cdx1P18111 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
Cdx1P18111 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.54□□□□□ -2
Cdx1P18111 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC2.54□□□□□ -2
Cdx1P18111 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.54□□□□□ -2
Cdx1P18111 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Cdx1P18111 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC2.54□□□□□ -2
Cdx1P18111 Gm4945-201ENSMUST00000075152 453 ntBASIC2.54□□□□□ -2
Cdx1P18111 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Cdx1P18111 Mir137-201ENSMUST00000083635 73 ntBASIC2.54□□□□□ -2
Cdx1P18111 Gm21286-201ENSMUST00000098035 545 ntBASIC2.54□□□□□ -2
Cdx1P18111 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Cdx1P18111 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cdx1P18111 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Cdx1P18111 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Cdx1P18111 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Cdx1P18111 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC2.53□□□□□ -2
Cdx1P18111 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Cdx1P18111 Gm649-201ENSMUST00000117284 1054 ntBASIC2.53□□□□□ -2
Cdx1P18111 Gm14751-201ENSMUST00000117693 222 ntBASIC2.53□□□□□ -2
Cdx1P18111 Gm14918-201ENSMUST00000118153 268 ntBASIC2.53□□□□□ -2
Cdx1P18111 Gm5762-201ENSMUST00000119204 258 ntBASIC2.53□□□□□ -2
Cdx1P18111 Gm12412-201ENSMUST00000121867 328 ntBASIC2.53□□□□□ -2
Cdx1P18111 Gm23791-201ENSMUST00000122553 293 ntBASIC2.53□□□□□ -2
Cdx1P18111 Gm22718-201ENSMUST00000122701 315 ntBASIC2.53□□□□□ -2
Cdx1P18111 Gm25295-201ENSMUST00000122794 306 ntBASIC2.53□□□□□ -2
Cdx1P18111 Gm25391-201ENSMUST00000157342 134 ntBASIC2.53□□□□□ -2
Cdx1P18111 Gm24138-201ENSMUST00000157572 114 ntBASIC2.53□□□□□ -2
Cdx1P18111 Gm26406-201ENSMUST00000158503 124 ntBASIC2.53□□□□□ -2
Cdx1P18111 Gm22416-201ENSMUST00000158590 88 ntBASIC2.53□□□□□ -2
Cdx1P18111 Gm25119-201ENSMUST00000158815 88 ntBASIC2.53□□□□□ -2
Cdx1P18111 Gm6788-201ENSMUST00000166459 270 ntBASIC2.53□□□□□ -2
Cdx1P18111 Gm17183-201ENSMUST00000171170 493 ntBASIC2.53□□□□□ -2
Cdx1P18111 Gm25470-201ENSMUST00000175576 111 ntBASIC2.53□□□□□ -2
Cdx1P18111 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.53□□□□□ -2
Cdx1P18111 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Cdx1P18111 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.53□□□□□ -2
Cdx1P18111 Gm43104-201ENSMUST00000197234 311 ntBASIC2.53□□□□□ -2
Cdx1P18111 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.53□□□□□ -2
Cdx1P18111 Gm44585-201ENSMUST00000207150 607 ntBASIC2.53□□□□□ -2
Cdx1P18111 Gm44927-201ENSMUST00000207573 716 ntBASIC2.53□□□□□ -2
Cdx1P18111 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.53□□□□□ -2
Cdx1P18111 AC124729.1-201ENSMUST00000225327 976 ntBASIC2.53□□□□□ -2
Cdx1P18111 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.53□□□□□ -2
Cdx1P18111 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Cdx1P18111 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.53□□□□□ -2
Cdx1P18111 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC2.53□□□□□ -2
Cdx1P18111 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Cdx1P18111 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms