Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC3.72□□□□□ -1.81
Col3a1P08121 Gm28560-201ENSMUST00000186091 315 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 Gm28334-201ENSMUST00000186653 315 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 Gm29335-201ENSMUST00000188361 459 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 Gm28495-201ENSMUST00000188452 315 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 Gm28232-201ENSMUST00000188683 315 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 Gm28481-201ENSMUST00000189231 315 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 Gm29218-205ENSMUST00000190846 615 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 Gm29059-201ENSMUST00000191534 315 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 Gm37765-201ENSMUST00000192395 315 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 Gm37237-201ENSMUST00000192893 315 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 Gm36968-201ENSMUST00000193737 315 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 Gm38290-201ENSMUST00000195238 315 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 Gm44320-201ENSMUST00000199276 86 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 Gm19457-201ENSMUST00000200995 448 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 AC164424.1-201ENSMUST00000221690 170 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Col3a1P08121 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Col3a1P08121 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col3a1P08121 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Col3a1P08121 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Col3a1P08121 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Col3a1P08121 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col3a1P08121 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.72□□□□□ -1.81
Col3a1P08121 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col3a1P08121 Gm19074-201ENSMUST00000218915 1429 ntBASIC3.71□□□□□ -1.82
Col3a1P08121 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
Col3a1P08121 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Col3a1P08121 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Col3a1P08121 AC154511.1-201ENSMUST00000222578 1587 ntBASIC3.71□□□□□ -1.82
Col3a1P08121 Mir467g-201ENSMUST00000116906 120 ntBASIC3.71□□□□□ -1.82
Col3a1P08121 Gm11322-201ENSMUST00000118095 435 ntBASIC3.71□□□□□ -1.82
Col3a1P08121 Gm22841-201ENSMUST00000158443 62 ntBASIC3.71□□□□□ -1.82
Col3a1P08121 Gm25048-201ENSMUST00000158598 91 ntBASIC3.71□□□□□ -1.82
Col3a1P08121 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC3.71□□□□□ -1.82
Col3a1P08121 Mir5123-201ENSMUST00000177794 83 ntBASIC3.71□□□□□ -1.82
Col3a1P08121 Gm29281-201ENSMUST00000188077 381 ntBASIC3.71□□□□□ -1.82
Col3a1P08121 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Col3a1P08121 Trbv22-201ENSMUST00000191697 291 ntBASIC3.71□□□□□ -1.82
Col3a1P08121 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC3.71□□□□□ -1.82
Col3a1P08121 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC3.71□□□□□ -1.82
Col3a1P08121 Gm42594-201ENSMUST00000199511 246 ntBASIC3.71□□□□□ -1.82
Col3a1P08121 Gm17906-201ENSMUST00000202480 901 ntBASIC3.71□□□□□ -1.82
Col3a1P08121 Gm44058-201ENSMUST00000204335 467 ntBASIC3.71□□□□□ -1.82
Col3a1P08121 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC3.71□□□□□ -1.82
Col3a1P08121 Gm36247-201ENSMUST00000211834 285 ntBASIC3.71□□□□□ -1.82
Col3a1P08121 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC3.71□□□□□ -1.82
Col3a1P08121 AC162376.1-201ENSMUST00000220120 435 ntBASIC3.71□□□□□ -1.82
Col3a1P08121 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Col3a1P08121 CT009733.1-201ENSMUST00000225322 425 ntBASIC3.71□□□□□ -1.82
Col3a1P08121 CT030662.3-201ENSMUST00000228751 476 ntBASIC3.71□□□□□ -1.82
Col3a1P08121 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Col3a1P08121 Gm26064-201ENSMUST00000083381 109 ntBASIC3.71□□□□□ -1.82
Col3a1P08121 Gm23097-201ENSMUST00000083448 105 ntBASIC3.71□□□□□ -1.82
Col3a1P08121 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Col3a1P08121 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC3.71□□□□□ -1.82
Col3a1P08121 Gm45257-201ENSMUST00000210301 3998 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Col3a1P08121 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC3.7□□□□□ -1.82
Col3a1P08121 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col3a1P08121 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Col3a1P08121 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Col3a1P08121 Gm25943-201ENSMUST00000103791 90 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 Mir466b-7-201ENSMUST00000103804 88 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 Mir466b-5-201ENSMUST00000103900 88 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 Gm13711-201ENSMUST00000119708 453 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 Gm12837-201ENSMUST00000120131 373 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 Gm5123-201ENSMUST00000121905 837 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 Mup-ps12-201ENSMUST00000126217 549 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 Gm9785-202ENSMUST00000144563 593 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 Gm5755-201ENSMUST00000152394 837 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 Gm24213-201ENSMUST00000158255 258 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 Gm3111-201ENSMUST00000167426 490 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 Gm20648-201ENSMUST00000175815 328 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col3a1P08121 Gm23269-201ENSMUST00000178701 107 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 Mir466b-4-201ENSMUST00000178801 90 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 Gm25285-201ENSMUST00000178951 90 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 Mir466b-6-201ENSMUST00000180061 90 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 Mir466c-2-201ENSMUST00000180211 90 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC3.7□□□□□ -1.82
Col3a1P08121 Gm31230-201ENSMUST00000199725 785 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 Gm43746-201ENSMUST00000200028 317 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 Gm32222-201ENSMUST00000203296 298 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 AC073947.3-201ENSMUST00000215576 766 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 Gm24917-201ENSMUST00000083935 104 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 Gm24522-201ENSMUST00000083964 108 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Col3a1P08121 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Col3a1P08121 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.7□□□□□ -1.82
Col3a1P08121 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col3a1P08121 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col3a1P08121 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Col3a1P08121 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col3a1P08121 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Col3a1P08121 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col3a1P08121 Gm38104-201ENSMUST00000195121 1895 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms