Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.54□□□□□ -1.84
Clk3O35492 Gm11522-201ENSMUST00000120533 176 ntBASIC3.54□□□□□ -1.84
Clk3O35492 Gm11403-201ENSMUST00000122195 369 ntBASIC3.54□□□□□ -1.84
Clk3O35492 Gm12368-201ENSMUST00000122251 434 ntBASIC3.54□□□□□ -1.84
Clk3O35492 Gm15147-201ENSMUST00000122263 483 ntBASIC3.54□□□□□ -1.84
Clk3O35492 Gm23887-201ENSMUST00000122683 172 ntBASIC3.54□□□□□ -1.84
Clk3O35492 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.54□□□□□ -1.84
Clk3O35492 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Clk3O35492 Gm22036-201ENSMUST00000157279 215 ntBASIC3.54□□□□□ -1.84
Clk3O35492 Gm22789-201ENSMUST00000157884 130 ntBASIC3.54□□□□□ -1.84
Clk3O35492 Gm23415-201ENSMUST00000175519 83 ntBASIC3.54□□□□□ -1.84
Clk3O35492 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Clk3O35492 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC3.54□□□□□ -1.84
Clk3O35492 Gm22290-201ENSMUST00000177655 107 ntBASIC3.54□□□□□ -1.84
Clk3O35492 Gm22583-201ENSMUST00000178031 107 ntBASIC3.54□□□□□ -1.84
Clk3O35492 Gm4761-201ENSMUST00000178086 582 ntBASIC3.54□□□□□ -1.84
Clk3O35492 Gm27660-201ENSMUST00000184028 208 ntBASIC3.54□□□□□ -1.84
Clk3O35492 Gm19498-201ENSMUST00000191128 331 ntBASIC3.54□□□□□ -1.84
Clk3O35492 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Clk3O35492 Gm42924-201ENSMUST00000197261 185 ntBASIC3.54□□□□□ -1.84
Clk3O35492 Gm43708-201ENSMUST00000198857 961 ntBASIC3.54□□□□□ -1.84
Clk3O35492 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.54□□□□□ -1.84
Clk3O35492 Gm44208-201ENSMUST00000205199 421 ntBASIC3.54□□□□□ -1.84
Clk3O35492 Gm44609-201ENSMUST00000207157 460 ntBASIC3.54□□□□□ -1.84
Clk3O35492 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC3.54□□□□□ -1.84
Clk3O35492 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC3.54□□□□□ -1.84
Clk3O35492 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC3.54□□□□□ -1.84
Clk3O35492 AC153506.2-201ENSMUST00000218051 257 ntBASIC3.54□□□□□ -1.84
Clk3O35492 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.54□□□□□ -1.84
Clk3O35492 Gm18774-201ENSMUST00000218269 601 ntBASIC3.54□□□□□ -1.84
Clk3O35492 AC123656.2-201ENSMUST00000226726 227 ntBASIC3.54□□□□□ -1.84
Clk3O35492 AC122341.1-201ENSMUST00000227291 560 ntBASIC3.54□□□□□ -1.84
Clk3O35492 CT030704.1-201ENSMUST00000227521 699 ntBASIC3.54□□□□□ -1.84
Clk3O35492 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Clk3O35492 Gm25859-201ENSMUST00000083710 91 ntBASIC3.54□□□□□ -1.84
Clk3O35492 Gm23848-201ENSMUST00000083826 106 ntBASIC3.54□□□□□ -1.84
Clk3O35492 Gm10212-201ENSMUST00000087884 324 ntBASIC3.54□□□□□ -1.84
Clk3O35492 Olfr713-201ENSMUST00000098139 975 ntBASIC3.54□□□□□ -1.84
Clk3O35492 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Clk3O35492 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Clk3O35492 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.54□□□□□ -1.84
Clk3O35492 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Clk3O35492 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Clk3O35492 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Clk3O35492 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Clk3O35492 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Clk3O35492 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Gm22758-201ENSMUST00000102275 96 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Clk3O35492 Gm14282-201ENSMUST00000119484 240 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Gm14049-201ENSMUST00000121009 636 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.53□□□□□ -1.84
Clk3O35492 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.53□□□□□ -1.84
Clk3O35492 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Clk3O35492 Gm23078-201ENSMUST00000157848 148 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Gm22889-201ENSMUST00000158639 58 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Gm24550-201ENSMUST00000158648 279 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Gm24666-201ENSMUST00000158937 167 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Clk3O35492 Gm23365-201ENSMUST00000175019 125 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Gm25960-201ENSMUST00000175110 125 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Gm44453-201ENSMUST00000175161 126 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Gm25195-201ENSMUST00000177656 126 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Gm28163-201ENSMUST00000187099 325 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Gm5829-201ENSMUST00000191383 351 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Gm37603-201ENSMUST00000192368 219 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Gm18403-201ENSMUST00000192907 529 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Gm37119-201ENSMUST00000195691 389 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Gm43415-201ENSMUST00000201934 750 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC3.53□□□□□ -1.84
Clk3O35492 Gm5175-202ENSMUST00000219699 529 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Gm35558-203ENSMUST00000222264 204 ntBASIC3.53□□□□□ -1.84
Clk3O35492 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.53□□□□□ -1.84
Clk3O35492 AC156790.3-201ENSMUST00000226200 254 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Clk3O35492 Gm25755-201ENSMUST00000083396 107 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.53□□□□□ -1.84
Clk3O35492 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Clk3O35492 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Clk3O35492 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Clk3O35492 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
Clk3O35492 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Clk3O35492 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Clk3O35492 Gm37598-201ENSMUST00000194506 1301 ntBASIC3.52□□□□□ -1.85
Clk3O35492 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.52□□□□□ -1.85
Clk3O35492 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.52□□□□□ -1.85
Clk3O35492 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.52□□□□□ -1.85
Clk3O35492 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.52□□□□□ -1.85
Clk3O35492 Gm14159-201ENSMUST00000119832 451 ntBASIC3.52□□□□□ -1.85
Clk3O35492 Gm14867-201ENSMUST00000120156 866 ntBASIC3.52□□□□□ -1.85
Clk3O35492 Gm13751-201ENSMUST00000120280 752 ntBASIC3.52□□□□□ -1.85
Clk3O35492 Gm13574-201ENSMUST00000120482 394 ntBASIC3.52□□□□□ -1.85
Clk3O35492 Gm6058-201ENSMUST00000154261 399 ntBASIC3.52□□□□□ -1.85
Clk3O35492 Gm22563-201ENSMUST00000157333 269 ntBASIC3.52□□□□□ -1.85
Clk3O35492 Mir3104-201ENSMUST00000174911 63 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms