Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm24858-201ENSMUST00000158058 323 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm23700-201ENSMUST00000158842 102 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm5263-201ENSMUST00000163646 601 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm24168-201ENSMUST00000178825 107 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm38053-201ENSMUST00000193938 160 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm37167-201ENSMUST00000194946 396 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm44389-201ENSMUST00000203795 182 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm8132-201ENSMUST00000204938 640 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm46138-201ENSMUST00000215294 426 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 AC152979.3-201ENSMUST00000217720 479 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm40692-201ENSMUST00000220411 491 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 AC154452.1-201ENSMUST00000225819 241 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm26446-201ENSMUST00000082455 103 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm26055-201ENSMUST00000083038 107 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Gm17976-201ENSMUST00000184037 1909 ntBASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Pcdh1F7BJK1 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Gm23422-201ENSMUST00000102000 107 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Gm24951-201ENSMUST00000102182 109 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Mir105-201ENSMUST00000104655 80 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Mir875-201ENSMUST00000104698 78 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Gm14304-201ENSMUST00000117272 446 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Gm12571-201ENSMUST00000118132 243 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Gm13153-201ENSMUST00000120969 637 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Gm12785-201ENSMUST00000122052 172 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 n-R5s192-201ENSMUST00000122577 119 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Gm23799-201ENSMUST00000175559 120 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Gm25360-201ENSMUST00000178786 191 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Gm28263-201ENSMUST00000185884 400 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Gm29665-201ENSMUST00000191457 528 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Gm42453-201ENSMUST00000200477 409 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Gm19177-201ENSMUST00000204520 613 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Gm45005-201ENSMUST00000206640 157 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Gm7407-201ENSMUST00000208301 568 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Gm6303-201ENSMUST00000210123 471 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 AC164161.1-201ENSMUST00000214076 639 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 AC163357.1-201ENSMUST00000220847 233 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Gm6462-201ENSMUST00000081488 304 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Gm26225-201ENSMUST00000082508 135 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Mir134-201ENSMUST00000083492 71 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Mir452-201ENSMUST00000093629 85 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Gm37983-201ENSMUST00000193207 2006 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.12□□□□□ -1.75
Pcdh1F7BJK1 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Pcdh1F7BJK1 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.11□□□□□ -1.75
Pcdh1F7BJK1 AC102369.2-201ENSMUST00000219725 1679 ntBASIC4.11□□□□□ -1.75
Pcdh1F7BJK1 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Pcdh1F7BJK1 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC4.11□□□□□ -1.75
Pcdh1F7BJK1 Gm23709-201ENSMUST00000104364 130 ntBASIC4.11□□□□□ -1.75
Pcdh1F7BJK1 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Pcdh1F7BJK1 Gm14512-201ENSMUST00000117924 230 ntBASIC4.11□□□□□ -1.75
Pcdh1F7BJK1 Gm14694-201ENSMUST00000121856 282 ntBASIC4.11□□□□□ -1.75
Pcdh1F7BJK1 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.11□□□□□ -1.75
Pcdh1F7BJK1 Gm22378-201ENSMUST00000157481 111 ntBASIC4.11□□□□□ -1.75
Pcdh1F7BJK1 Gm22219-201ENSMUST00000157562 319 ntBASIC4.11□□□□□ -1.75
Pcdh1F7BJK1 Gm23704-201ENSMUST00000158844 340 ntBASIC4.11□□□□□ -1.75
Pcdh1F7BJK1 Gm8114-201ENSMUST00000172225 484 ntBASIC4.11□□□□□ -1.75
Pcdh1F7BJK1 Gm27699-201ENSMUST00000183553 180 ntBASIC4.11□□□□□ -1.75
Pcdh1F7BJK1 Gm27803-201ENSMUST00000183763 119 ntBASIC4.11□□□□□ -1.75
Pcdh1F7BJK1 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.11□□□□□ -1.75
Pcdh1F7BJK1 Gm29320-201ENSMUST00000185235 615 ntBASIC4.11□□□□□ -1.75
Pcdh1F7BJK1 Gm29179-202ENSMUST00000186138 615 ntBASIC4.11□□□□□ -1.75
Pcdh1F7BJK1 Gm29448-201ENSMUST00000186675 615 ntBASIC4.11□□□□□ -1.75
Pcdh1F7BJK1 Gm29314-201ENSMUST00000186800 615 ntBASIC4.11□□□□□ -1.75
Pcdh1F7BJK1 Gm28253-202ENSMUST00000187971 615 ntBASIC4.11□□□□□ -1.75
Pcdh1F7BJK1 Gm29169-201ENSMUST00000189835 615 ntBASIC4.11□□□□□ -1.75
Pcdh1F7BJK1 Gm37601-201ENSMUST00000194922 394 ntBASIC4.11□□□□□ -1.75
Pcdh1F7BJK1 Gm42672-201ENSMUST00000197821 352 ntBASIC4.11□□□□□ -1.75
Pcdh1F7BJK1 Gm8069-201ENSMUST00000197887 154 ntBASIC4.11□□□□□ -1.75
Pcdh1F7BJK1 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms