Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Col6a3E9PWQ3 Mir26a-1-201ENSMUST00000083579 90 ntBASIC1.98□□□□□ -2.09
Col6a3E9PWQ3 Gm37407-201ENSMUST00000194793 1316 ntBASIC1.97□□□□□ -2.09
Col6a3E9PWQ3 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC1.97□□□□□ -2.09
Col6a3E9PWQ3 Gm8031-201ENSMUST00000213430 626 ntBASIC1.97□□□□□ -2.09
Col6a3E9PWQ3 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC1.97□□□□□ -2.09
Col6a3E9PWQ3 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC1.97□□□□□ -2.09
Col6a3E9PWQ3 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Col6a3E9PWQ3 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
Col6a3E9PWQ3 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Col6a3E9PWQ3 Gm14229-201ENSMUST00000121178 850 ntBASIC1.97□□□□□ -2.09
Col6a3E9PWQ3 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
Col6a3E9PWQ3 Gm43494-201ENSMUST00000197672 388 ntBASIC1.97□□□□□ -2.09
Col6a3E9PWQ3 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Col6a3E9PWQ3 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Col6a3E9PWQ3 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Col6a3E9PWQ3 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Col6a3E9PWQ3 Gm42537-201ENSMUST00000198260 2574 ntBASIC1.97□□□□□ -2.09
Col6a3E9PWQ3 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Col6a3E9PWQ3 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC1.97□□□□□ -2.09
Col6a3E9PWQ3 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC1.97□□□□□ -2.09
Col6a3E9PWQ3 AC174082.1-201ENSMUST00000221106 307 ntBASIC1.97□□□□□ -2.09
Col6a3E9PWQ3 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.97□□□□□ -2.09
Col6a3E9PWQ3 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Col6a3E9PWQ3 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
Col6a3E9PWQ3 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
Col6a3E9PWQ3 Gm43780-201ENSMUST00000196510 3600 ntBASIC1.96□□□□□ -2.1
Col6a3E9PWQ3 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Col6a3E9PWQ3 Gm22486-201ENSMUST00000116815 137 ntBASIC1.96□□□□□ -2.1
Col6a3E9PWQ3 Gm13755-201ENSMUST00000118509 305 ntBASIC1.96□□□□□ -2.1
Col6a3E9PWQ3 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Col6a3E9PWQ3 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
Col6a3E9PWQ3 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC1.96□□□□□ -2.1
Col6a3E9PWQ3 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC1.96□□□□□ -2.1
Col6a3E9PWQ3 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Col6a3E9PWQ3 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Col6a3E9PWQ3 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Col6a3E9PWQ3 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Col6a3E9PWQ3 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Col6a3E9PWQ3 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Col6a3E9PWQ3 Gm27753-201ENSMUST00000184742 203 ntBASIC1.96□□□□□ -2.1
Col6a3E9PWQ3 Gm38356-201ENSMUST00000194313 408 ntBASIC1.96□□□□□ -2.1
Col6a3E9PWQ3 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.96□□□□□ -2.1
Col6a3E9PWQ3 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Col6a3E9PWQ3 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Col6a3E9PWQ3 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
Col6a3E9PWQ3 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1.95□□□□□ -2.1
Col6a3E9PWQ3 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.95□□□□□ -2.1
Col6a3E9PWQ3 Gm45268-201ENSMUST00000210046 370 ntBASIC1.95□□□□□ -2.1
Col6a3E9PWQ3 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Col6a3E9PWQ3 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC1.95□□□□□ -2.1
Col6a3E9PWQ3 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.95□□□□□ -2.1
Col6a3E9PWQ3 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Col6a3E9PWQ3 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Col6a3E9PWQ3 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC1.95□□□□□ -2.1
Col6a3E9PWQ3 Gm14923-201ENSMUST00000118270 155 ntBASIC1.95□□□□□ -2.1
Col6a3E9PWQ3 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC1.95□□□□□ -2.1
Col6a3E9PWQ3 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC1.95□□□□□ -2.1
Col6a3E9PWQ3 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Col6a3E9PWQ3 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Col6a3E9PWQ3 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC1.95□□□□□ -2.1
Col6a3E9PWQ3 Gm7909-201ENSMUST00000182688 614 ntBASIC1.95□□□□□ -2.1
Col6a3E9PWQ3 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC1.95□□□□□ -2.1
Col6a3E9PWQ3 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC1.95□□□□□ -2.1
Col6a3E9PWQ3 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
Col6a3E9PWQ3 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC1.94□□□□□ -2.1
Col6a3E9PWQ3 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Col6a3E9PWQ3 Gm18899-201ENSMUST00000217663 546 ntBASIC1.94□□□□□ -2.1
Col6a3E9PWQ3 AC166323.1-201ENSMUST00000217756 367 ntBASIC1.94□□□□□ -2.1
Col6a3E9PWQ3 Gm37895-201ENSMUST00000192448 4550 ntBASIC1.94□□□□□ -2.1
Col6a3E9PWQ3 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Col6a3E9PWQ3 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.94□□□□□ -2.1
Col6a3E9PWQ3 Gm22389-201ENSMUST00000158193 301 ntBASIC1.94□□□□□ -2.1
Col6a3E9PWQ3 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.94□□□□□ -2.1
Col6a3E9PWQ3 CT009754.4-201ENSMUST00000221430 565 ntBASIC1.94□□□□□ -2.1
Col6a3E9PWQ3 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC1.93□□□□□ -2.1
Col6a3E9PWQ3 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.93□□□□□ -2.1
Col6a3E9PWQ3 Mir148b-201ENSMUST00000083626 97 ntBASIC1.93□□□□□ -2.1
Col6a3E9PWQ3 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Col6a3E9PWQ3 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Col6a3E9PWQ3 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Col6a3E9PWQ3 Snord14c-201ENSMUST00000101927 86 ntBASIC1.93□□□□□ -2.1
Col6a3E9PWQ3 Gm23015-201ENSMUST00000104145 128 ntBASIC1.93□□□□□ -2.1
Col6a3E9PWQ3 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC1.93□□□□□ -2.1
Col6a3E9PWQ3 Gm13457-201ENSMUST00000117885 267 ntBASIC1.93□□□□□ -2.1
Col6a3E9PWQ3 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC1.93□□□□□ -2.1
Col6a3E9PWQ3 Gm22945-201ENSMUST00000158557 157 ntBASIC1.93□□□□□ -2.1
Col6a3E9PWQ3 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Col6a3E9PWQ3 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Col6a3E9PWQ3 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC1.92□□□□□ -2.1
Col6a3E9PWQ3 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC1.92□□□□□ -2.1
Col6a3E9PWQ3 Gm12876-201ENSMUST00000120975 408 ntBASIC1.92□□□□□ -2.1
Col6a3E9PWQ3 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Col6a3E9PWQ3 AF357341-201ENSMUST00000083088 75 ntBASIC1.92□□□□□ -2.1
Col6a3E9PWQ3 Gm22740-201ENSMUST00000083439 109 ntBASIC1.92□□□□□ -2.1
Col6a3E9PWQ3 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Col6a3E9PWQ3 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
Col6a3E9PWQ3 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Col6a3E9PWQ3 Gm42482-201ENSMUST00000198904 1947 ntBASIC1.92□□□□□ -2.1
Col6a3E9PWQ3 Gm15773-201ENSMUST00000118665 1448 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms