Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC2.56□□□□□ -2
IsxA1A546 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.56□□□□□ -2
IsxA1A546 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC2.56□□□□□ -2
IsxA1A546 Gm22225-201ENSMUST00000157358 278 ntBASIC2.56□□□□□ -2
IsxA1A546 Gm26349-201ENSMUST00000157530 130 ntBASIC2.56□□□□□ -2
IsxA1A546 Gm22769-201ENSMUST00000158367 98 ntBASIC2.56□□□□□ -2
IsxA1A546 Gm26406-201ENSMUST00000158503 124 ntBASIC2.56□□□□□ -2
IsxA1A546 Gm26215-201ENSMUST00000158584 139 ntBASIC2.56□□□□□ -2
IsxA1A546 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
IsxA1A546 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
IsxA1A546 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC2.56□□□□□ -2
IsxA1A546 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.56□□□□□ -2
IsxA1A546 Gm25026-201ENSMUST00000175017 188 ntBASIC2.56□□□□□ -2
IsxA1A546 Gm25120-201ENSMUST00000180148 79 ntBASIC2.56□□□□□ -2
IsxA1A546 Gm17790-201ENSMUST00000191545 1228 ntBASIC2.56□□□□□ -2
IsxA1A546 Gm18956-201ENSMUST00000192857 480 ntBASIC2.56□□□□□ -2
IsxA1A546 Gm37576-201ENSMUST00000194228 372 ntBASIC2.56□□□□□ -2
IsxA1A546 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.56□□□□□ -2
IsxA1A546 Gm43669-201ENSMUST00000198229 436 ntBASIC2.56□□□□□ -2
IsxA1A546 Gm5551-201ENSMUST00000199720 690 ntBASIC2.56□□□□□ -2
IsxA1A546 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC2.56□□□□□ -2
IsxA1A546 AC140785.1-201ENSMUST00000217782 383 ntBASIC2.56□□□□□ -2
IsxA1A546 Gm19540-201ENSMUST00000221843 810 ntBASIC2.56□□□□□ -2
IsxA1A546 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC2.56□□□□□ -2
IsxA1A546 Gm4017-201ENSMUST00000084813 338 ntBASIC2.56□□□□□ -2
IsxA1A546 Gm10780-201ENSMUST00000099459 285 ntBASIC2.56□□□□□ -2
IsxA1A546 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
IsxA1A546 Gm22486-201ENSMUST00000116815 137 ntBASIC2.55□□□□□ -2
IsxA1A546 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
IsxA1A546 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.55□□□□□ -2
IsxA1A546 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC2.55□□□□□ -2
IsxA1A546 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.55□□□□□ -2
IsxA1A546 Gm25373-201ENSMUST00000158156 115 ntBASIC2.55□□□□□ -2
IsxA1A546 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC2.55□□□□□ -2
IsxA1A546 Mir7k-201ENSMUST00000184115 110 ntBASIC2.55□□□□□ -2
IsxA1A546 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC2.55□□□□□ -2
IsxA1A546 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.55□□□□□ -2
IsxA1A546 Gm43930-201ENSMUST00000203868 845 ntBASIC2.55□□□□□ -2
IsxA1A546 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.55□□□□□ -2
IsxA1A546 Gm44208-201ENSMUST00000205199 421 ntBASIC2.55□□□□□ -2
IsxA1A546 Gm44520-201ENSMUST00000205447 802 ntBASIC2.55□□□□□ -2
IsxA1A546 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC2.55□□□□□ -2
IsxA1A546 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC2.55□□□□□ -2
IsxA1A546 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
IsxA1A546 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC2.55□□□□□ -2
IsxA1A546 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC2.55□□□□□ -2
IsxA1A546 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
IsxA1A546 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.55□□□□□ -2
IsxA1A546 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC2.55□□□□□ -2
IsxA1A546 AC153924.1-201ENSMUST00000220117 312 ntBASIC2.55□□□□□ -2
IsxA1A546 Platr25-208ENSMUST00000222602 939 ntBASIC2.55□□□□□ -2
IsxA1A546 Gm9370-201ENSMUST00000222787 609 ntBASIC2.55□□□□□ -2
IsxA1A546 CT571256.1-201ENSMUST00000226045 585 ntBASIC2.55□□□□□ -2
IsxA1A546 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.55□□□□□ -2
IsxA1A546 AC158142.2-201ENSMUST00000227892 635 ntBASIC2.55□□□□□ -2
IsxA1A546 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC2.55□□□□□ -2
IsxA1A546 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
IsxA1A546 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
IsxA1A546 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
IsxA1A546 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.54□□□□□ -2
IsxA1A546 Gm13504-201ENSMUST00000117490 316 ntBASIC2.54□□□□□ -2
IsxA1A546 Gm12889-201ENSMUST00000118684 241 ntBASIC2.54□□□□□ -2
IsxA1A546 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
IsxA1A546 Gm15272-201ENSMUST00000120865 233 ntBASIC2.54□□□□□ -2
IsxA1A546 Gm9001-201ENSMUST00000121642 399 ntBASIC2.54□□□□□ -2
IsxA1A546 Gm14389-201ENSMUST00000140453 241 ntBASIC2.54□□□□□ -2
IsxA1A546 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.54□□□□□ -2
IsxA1A546 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC2.54□□□□□ -2
IsxA1A546 Gm22307-201ENSMUST00000180019 107 ntBASIC2.54□□□□□ -2
IsxA1A546 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC2.54□□□□□ -2
IsxA1A546 Gm27783-201ENSMUST00000183534 105 ntBASIC2.54□□□□□ -2
IsxA1A546 Gm29259-201ENSMUST00000186396 694 ntBASIC2.54□□□□□ -2
IsxA1A546 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
IsxA1A546 Gm38214-201ENSMUST00000192581 988 ntBASIC2.54□□□□□ -2
IsxA1A546 Gm9632-201ENSMUST00000195934 643 ntBASIC2.54□□□□□ -2
IsxA1A546 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.54□□□□□ -2
IsxA1A546 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC2.54□□□□□ -2
IsxA1A546 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.54□□□□□ -2
IsxA1A546 AC154636.3-201ENSMUST00000221489 1214 ntBASIC2.54□□□□□ -2
IsxA1A546 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC2.54□□□□□ -2
IsxA1A546 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.54□□□□□ -2
IsxA1A546 AC125523.1-201ENSMUST00000228018 934 ntBASIC2.54□□□□□ -2
IsxA1A546 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.54□□□□□ -2
IsxA1A546 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.54□□□□□ -2
IsxA1A546 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC2.54□□□□□ -2
IsxA1A546 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.54□□□□□ -2
IsxA1A546 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.54□□□□□ -2
IsxA1A546 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.54□□□□□ -2
IsxA1A546 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
IsxA1A546 AC153881.3-201ENSMUST00000218494 1561 ntBASIC2.53□□□□□ -2
IsxA1A546 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC2.53□□□□□ -2
IsxA1A546 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
IsxA1A546 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.53□□□□□ -2
IsxA1A546 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
IsxA1A546 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.53□□□□□ -2
IsxA1A546 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
IsxA1A546 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.53□□□□□ -2
IsxA1A546 Gm12156-201ENSMUST00000119188 554 ntBASIC2.53□□□□□ -2
IsxA1A546 Gm14731-201ENSMUST00000119216 376 ntBASIC2.53□□□□□ -2
IsxA1A546 Gm11598-201ENSMUST00000119257 357 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms