Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm6913-201ENSMUST00000100019 348 ntBASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm23577-201ENSMUST00000103950 110 ntBASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm25728-201ENSMUST00000104525 159 ntBASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm11285-201ENSMUST00000118443 322 ntBASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm23886-201ENSMUST00000122684 313 ntBASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm23599-201ENSMUST00000157261 251 ntBASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm22187-201ENSMUST00000157819 129 ntBASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm17061-201ENSMUST00000163167 499 ntBASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm22853-201ENSMUST00000174974 131 ntBASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm24968-201ENSMUST00000179817 107 ntBASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm7870-201ENSMUST00000184467 616 ntBASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm37979-201ENSMUST00000193065 712 ntBASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm43541-201ENSMUST00000197208 581 ntBASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm5551-201ENSMUST00000199720 690 ntBASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm45912-201ENSMUST00000210646 543 ntBASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 AC164629.1-201ENSMUST00000220250 1113 ntBASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 AC117656.3-204ENSMUST00000225656 859 ntBASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm7171-201ENSMUST00000177413 1349 ntBASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm11576-201ENSMUST00000117433 417 ntBASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm12268-201ENSMUST00000118398 442 ntBASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm14566-201ENSMUST00000118915 321 ntBASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm12640-201ENSMUST00000120097 310 ntBASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm25224-201ENSMUST00000158195 68 ntBASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm23819-201ENSMUST00000158744 109 ntBASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm24876-201ENSMUST00000158780 92 ntBASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Snord53-201ENSMUST00000175146 78 ntBASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm27342-201ENSMUST00000183530 109 ntBASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm29658-201ENSMUST00000185404 230 ntBASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm37281-201ENSMUST00000192412 439 ntBASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm18956-201ENSMUST00000192857 480 ntBASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm44058-201ENSMUST00000204335 467 ntBASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm45023-201ENSMUST00000207951 379 ntBASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm7948-201ENSMUST00000212607 844 ntBASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 AC107757.3-201ENSMUST00000226312 535 ntBASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.23□□□□□ -2.05
Trbv1A0A0B4J1G7 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm7133-201ENSMUST00000187797 2039 ntBASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm13329-201ENSMUST00000117063 265 ntBASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm23754-201ENSMUST00000157576 63 ntBASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm6264-202ENSMUST00000162896 1217 ntBASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm23415-201ENSMUST00000175519 83 ntBASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm20648-201ENSMUST00000175815 328 ntBASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm20651-201ENSMUST00000177219 329 ntBASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 Mir5123-201ENSMUST00000177794 83 ntBASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm26701-201ENSMUST00000181571 234 ntBASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 Mir6353-201ENSMUST00000183596 113 ntBASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm27861-201ENSMUST00000183920 214 ntBASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm37576-201ENSMUST00000194228 372 ntBASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 Nras-ps2-201ENSMUST00000195269 178 ntBASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 Igkv13-82-201ENSMUST00000200308 346 ntBASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm29920-201ENSMUST00000206876 754 ntBASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm6012-201ENSMUST00000210821 730 ntBASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm35558-202ENSMUST00000221819 499 ntBASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 AC101945.3-201ENSMUST00000226568 153 ntBASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 CT030684.2-201ENSMUST00000228946 826 ntBASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 n-R5s166-201ENSMUST00000082898 121 ntBASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms