Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Gm45678-201ENSMUST00000210509 295 ntBASIC1.83□□□□□ -2.12
Trav6-6A0A075B603 Gm45400-201ENSMUST00000211603 653 ntBASIC1.83□□□□□ -2.12
Trav6-6A0A075B603 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC1.83□□□□□ -2.12
Trav6-6A0A075B603 Gm2436-201ENSMUST00000219562 774 ntBASIC1.83□□□□□ -2.12
Trav6-6A0A075B603 AC126673.2-201ENSMUST00000221052 686 ntBASIC1.83□□□□□ -2.12
Trav6-6A0A075B603 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC1.83□□□□□ -2.12
Trav6-6A0A075B603 CT571268.1-201ENSMUST00000222320 407 ntBASIC1.83□□□□□ -2.12
Trav6-6A0A075B603 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC1.83□□□□□ -2.12
Trav6-6A0A075B603 AC132881.2-201ENSMUST00000225474 709 ntBASIC1.83□□□□□ -2.12
Trav6-6A0A075B603 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Trav6-6A0A075B603 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Trav6-6A0A075B603 n-R5s40-201ENSMUST00000082475 124 ntBASIC1.83□□□□□ -2.12
Trav6-6A0A075B603 Gm25856-201ENSMUST00000082786 75 ntBASIC1.83□□□□□ -2.12
Trav6-6A0A075B603 n-R5s50-201ENSMUST00000083168 111 ntBASIC1.83□□□□□ -2.12
Trav6-6A0A075B603 Gm42967-201ENSMUST00000198647 2312 ntBASIC1.83□□□□□ -2.12
Trav6-6A0A075B603 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
Trav6-6A0A075B603 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Trav6-6A0A075B603 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Trav6-6A0A075B603 Gm14910-201ENSMUST00000121037 1805 ntBASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 Gm24127-201ENSMUST00000104110 130 ntBASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 Gm14973-201ENSMUST00000117248 255 ntBASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 Gm12386-201ENSMUST00000117380 688 ntBASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 Gm22957-201ENSMUST00000122511 123 ntBASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 Gm17187-201ENSMUST00000164622 410 ntBASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 Gm6788-201ENSMUST00000166459 270 ntBASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 Gm6801-201ENSMUST00000190697 339 ntBASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 Gm9696-202ENSMUST00000191541 830 ntBASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 Gm38076-201ENSMUST00000193889 450 ntBASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 Gm43765-201ENSMUST00000196303 893 ntBASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 Gm44665-201ENSMUST00000205381 251 ntBASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 Gm8031-201ENSMUST00000213430 626 ntBASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 AC160970.1-201ENSMUST00000219311 475 ntBASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 AC159242.1-201ENSMUST00000225832 194 ntBASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 CT030704.1-201ENSMUST00000227521 699 ntBASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 AC117588.2-201ENSMUST00000228340 311 ntBASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 Gm45257-201ENSMUST00000210301 3998 ntBASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 Gm37236-201ENSMUST00000193670 3249 ntBASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 Gm15975-201ENSMUST00000122385 1402 ntBASIC1.82□□□□□ -2.12
Trav6-6A0A075B603 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 AC154511.1-201ENSMUST00000222578 1587 ntBASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Gm16436-201ENSMUST00000121510 1607 ntBASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 n-R5s26-201ENSMUST00000104601 122 ntBASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Gm5937-201ENSMUST00000119715 643 ntBASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Gm12383-201ENSMUST00000120628 760 ntBASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Gm22478-201ENSMUST00000122570 154 ntBASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Gm23865-201ENSMUST00000157723 97 ntBASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Gm23476-201ENSMUST00000158881 274 ntBASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Gm24875-201ENSMUST00000158888 104 ntBASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Gm9587-201ENSMUST00000172449 454 ntBASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Mir3965-201ENSMUST00000175570 69 ntBASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Olfr1055-202ENSMUST00000188023 939 ntBASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Gm9541-201ENSMUST00000188409 502 ntBASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Gm6060-201ENSMUST00000188671 251 ntBASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Gm18551-201ENSMUST00000195594 642 ntBASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Gm9632-201ENSMUST00000195934 643 ntBASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Gm43930-201ENSMUST00000203868 845 ntBASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Gm7133-201ENSMUST00000187797 2039 ntBASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Trav6-6A0A075B603 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.8□□□□□ -2.12
Trav6-6A0A075B603 AC115047.2-201ENSMUST00000214421 1848 ntBASIC1.8□□□□□ -2.12
Trav6-6A0A075B603 Gm4855-201ENSMUST00000192270 1967 ntBASIC1.8□□□□□ -2.12
Trav6-6A0A075B603 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC1.8□□□□□ -2.12
Trav6-6A0A075B603 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Trav6-6A0A075B603 Gm11898-201ENSMUST00000117161 385 ntBASIC1.8□□□□□ -2.12
Trav6-6A0A075B603 Gm15844-201ENSMUST00000118016 576 ntBASIC1.8□□□□□ -2.12
Trav6-6A0A075B603 Gm11357-201ENSMUST00000119758 954 ntBASIC1.8□□□□□ -2.12
Trav6-6A0A075B603 Gm7350-201ENSMUST00000120964 636 ntBASIC1.8□□□□□ -2.12
Trav6-6A0A075B603 Gm8880-201ENSMUST00000121800 454 ntBASIC1.8□□□□□ -2.12
Trav6-6A0A075B603 Mup-ps12-201ENSMUST00000126217 549 ntBASIC1.8□□□□□ -2.12
Trav6-6A0A075B603 Gm20450-201ENSMUST00000173652 147 ntBASIC1.8□□□□□ -2.12
Trav6-6A0A075B603 Gm23415-201ENSMUST00000175519 83 ntBASIC1.8□□□□□ -2.12
Trav6-6A0A075B603 Gm24019-201ENSMUST00000178620 107 ntBASIC1.8□□□□□ -2.12
Trav6-6A0A075B603 Gm26243-201ENSMUST00000179260 107 ntBASIC1.8□□□□□ -2.12
Trav6-6A0A075B603 Gm25528-201ENSMUST00000180264 132 ntBASIC1.8□□□□□ -2.12
Trav6-6A0A075B603 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC1.8□□□□□ -2.12
Trav6-6A0A075B603 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC1.8□□□□□ -2.12
Trav6-6A0A075B603 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC1.8□□□□□ -2.12
Trav6-6A0A075B603 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC1.8□□□□□ -2.12
Trav6-6A0A075B603 Gm44476-201ENSMUST00000196225 91 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 120.6 ms