Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC2.21□□□□□ -2.05
Scn8aQ9WTU3 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.05
Scn8aQ9WTU3 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
Scn8aQ9WTU3 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
Scn8aQ9WTU3 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
Scn8aQ9WTU3 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Scn8aQ9WTU3 Gm7135-202ENSMUST00000191257 1905 ntBASIC2.21□□□□□ -2.06
Scn8aQ9WTU3 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.21□□□□□ -2.06
Scn8aQ9WTU3 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Scn8aQ9WTU3 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Scn8aQ9WTU3 Gm26280-201ENSMUST00000157096 101 ntBASIC2.21□□□□□ -2.06
Scn8aQ9WTU3 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Scn8aQ9WTU3 Gm17929-201ENSMUST00000186851 627 ntBASIC2.21□□□□□ -2.06
Scn8aQ9WTU3 Gm3010-201ENSMUST00000198805 448 ntBASIC2.21□□□□□ -2.06
Scn8aQ9WTU3 Gm45445-201ENSMUST00000209586 232 ntBASIC2.21□□□□□ -2.06
Scn8aQ9WTU3 AC154851.2-201ENSMUST00000222172 644 ntBASIC2.21□□□□□ -2.06
Scn8aQ9WTU3 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.21□□□□□ -2.06
Scn8aQ9WTU3 Snord104-201ENSMUST00000083192 70 ntBASIC2.21□□□□□ -2.06
Scn8aQ9WTU3 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
Scn8aQ9WTU3 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Scn8aQ9WTU3 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC2.2□□□□□ -2.06
Scn8aQ9WTU3 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.2□□□□□ -2.06
Scn8aQ9WTU3 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.2□□□□□ -2.06
Scn8aQ9WTU3 Gm22257-201ENSMUST00000158687 301 ntBASIC2.2□□□□□ -2.06
Scn8aQ9WTU3 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2.2□□□□□ -2.06
Scn8aQ9WTU3 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Scn8aQ9WTU3 Gm28399-201ENSMUST00000186221 318 ntBASIC2.2□□□□□ -2.06
Scn8aQ9WTU3 Gm28572-201ENSMUST00000187444 318 ntBASIC2.2□□□□□ -2.06
Scn8aQ9WTU3 Gm29365-201ENSMUST00000189461 699 ntBASIC2.2□□□□□ -2.06
Scn8aQ9WTU3 Gm29525-201ENSMUST00000189844 699 ntBASIC2.2□□□□□ -2.06
Scn8aQ9WTU3 Gm29524-201ENSMUST00000190819 699 ntBASIC2.2□□□□□ -2.06
Scn8aQ9WTU3 Gm29523-201ENSMUST00000191415 699 ntBASIC2.2□□□□□ -2.06
Scn8aQ9WTU3 Gm43722-201ENSMUST00000196054 124 ntBASIC2.2□□□□□ -2.06
Scn8aQ9WTU3 Gm43512-201ENSMUST00000198495 176 ntBASIC2.2□□□□□ -2.06
Scn8aQ9WTU3 Gm44477-201ENSMUST00000199661 110 ntBASIC2.2□□□□□ -2.06
Scn8aQ9WTU3 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.2□□□□□ -2.06
Scn8aQ9WTU3 Gm17890-201ENSMUST00000221419 757 ntBASIC2.2□□□□□ -2.06
Scn8aQ9WTU3 Gm2544-201ENSMUST00000222702 756 ntBASIC2.2□□□□□ -2.06
Scn8aQ9WTU3 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.2□□□□□ -2.06
Scn8aQ9WTU3 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Scn8aQ9WTU3 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Scn8aQ9WTU3 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.2□□□□□ -2.06
Scn8aQ9WTU3 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Scn8aQ9WTU3 Gm26473-201ENSMUST00000116763 127 ntBASIC2.19□□□□□ -2.06
Scn8aQ9WTU3 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.19□□□□□ -2.06
Scn8aQ9WTU3 Gm11890-201ENSMUST00000119585 417 ntBASIC2.19□□□□□ -2.06
Scn8aQ9WTU3 Gm24900-201ENSMUST00000158128 134 ntBASIC2.19□□□□□ -2.06
Scn8aQ9WTU3 Ear-ps7-201ENSMUST00000161287 442 ntBASIC2.19□□□□□ -2.06
Scn8aQ9WTU3 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Scn8aQ9WTU3 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.19□□□□□ -2.06
Scn8aQ9WTU3 Gm28627-201ENSMUST00000186141 453 ntBASIC2.19□□□□□ -2.06
Scn8aQ9WTU3 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.19□□□□□ -2.06
Scn8aQ9WTU3 Trbv18-201ENSMUST00000194256 294 ntBASIC2.19□□□□□ -2.06
Scn8aQ9WTU3 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.19□□□□□ -2.06
Scn8aQ9WTU3 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
Scn8aQ9WTU3 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Scn8aQ9WTU3 Mir669d-201ENSMUST00000104644 121 ntBASIC2.19□□□□□ -2.06
Scn8aQ9WTU3 Gm12401-201ENSMUST00000118435 228 ntBASIC2.19□□□□□ -2.06
Scn8aQ9WTU3 Gm11965-201ENSMUST00000122017 277 ntBASIC2.19□□□□□ -2.06
Scn8aQ9WTU3 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.19□□□□□ -2.06
Scn8aQ9WTU3 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC2.19□□□□□ -2.06
Scn8aQ9WTU3 Gm18611-201ENSMUST00000200334 1118 ntBASIC2.19□□□□□ -2.06
Scn8aQ9WTU3 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.19□□□□□ -2.06
Scn8aQ9WTU3 Gm5175-202ENSMUST00000219699 529 ntBASIC2.19□□□□□ -2.06
Scn8aQ9WTU3 Gm9472-201ENSMUST00000221625 526 ntBASIC2.19□□□□□ -2.06
Scn8aQ9WTU3 Gm17872-201ENSMUST00000222550 532 ntBASIC2.19□□□□□ -2.06
Scn8aQ9WTU3 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Scn8aQ9WTU3 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.18□□□□□ -2.06
Scn8aQ9WTU3 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Scn8aQ9WTU3 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
Scn8aQ9WTU3 Gm24478-201ENSMUST00000157439 158 ntBASIC2.18□□□□□ -2.06
Scn8aQ9WTU3 Gm16326-201ENSMUST00000162843 414 ntBASIC2.18□□□□□ -2.06
Scn8aQ9WTU3 Gm28802-201ENSMUST00000188624 944 ntBASIC2.18□□□□□ -2.06
Scn8aQ9WTU3 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC2.18□□□□□ -2.06
Scn8aQ9WTU3 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC2.18□□□□□ -2.06
Scn8aQ9WTU3 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC2.18□□□□□ -2.06
Scn8aQ9WTU3 AC158536.1-201ENSMUST00000222510 256 ntBASIC2.18□□□□□ -2.06
Scn8aQ9WTU3 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Scn8aQ9WTU3 Gm13439-201ENSMUST00000117541 409 ntBASIC2.18□□□□□ -2.06
Scn8aQ9WTU3 Gm12941-201ENSMUST00000117934 220 ntBASIC2.18□□□□□ -2.06
Scn8aQ9WTU3 Gm14927-201ENSMUST00000120283 454 ntBASIC2.18□□□□□ -2.06
Scn8aQ9WTU3 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.18□□□□□ -2.06
Scn8aQ9WTU3 Gm23642-201ENSMUST00000157858 258 ntBASIC2.18□□□□□ -2.06
Scn8aQ9WTU3 Gm24601-201ENSMUST00000157970 143 ntBASIC2.18□□□□□ -2.06
Scn8aQ9WTU3 Samd15-201ENSMUST00000169669 1194 ntBASIC2.18□□□□□ -2.06
Scn8aQ9WTU3 Gm42438-201ENSMUST00000197832 974 ntBASIC2.18□□□□□ -2.06
Scn8aQ9WTU3 Gm2676-201ENSMUST00000207279 606 ntBASIC2.18□□□□□ -2.06
Scn8aQ9WTU3 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC2.18□□□□□ -2.06
Scn8aQ9WTU3 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Scn8aQ9WTU3 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Scn8aQ9WTU3 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.17□□□□□ -2.06
Scn8aQ9WTU3 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Scn8aQ9WTU3 Gm23942-201ENSMUST00000101956 107 ntBASIC2.17□□□□□ -2.06
Scn8aQ9WTU3 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC2.17□□□□□ -2.06
Scn8aQ9WTU3 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.17□□□□□ -2.06
Scn8aQ9WTU3 Gm25945-201ENSMUST00000122484 135 ntBASIC2.17□□□□□ -2.06
Scn8aQ9WTU3 Gm22026-201ENSMUST00000122735 281 ntBASIC2.17□□□□□ -2.06
Scn8aQ9WTU3 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Scn8aQ9WTU3 Mir6406-201ENSMUST00000183592 120 ntBASIC2.17□□□□□ -2.06
Scn8aQ9WTU3 Gm27477-201ENSMUST00000184649 143 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms