Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
Cdc40Q9DC48 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
Cdc40Q9DC48 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Cdc40Q9DC48 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC2.72□□□□□ -1.97
Cdc40Q9DC48 Gm12881-201ENSMUST00000121191 203 ntBASIC2.72□□□□□ -1.97
Cdc40Q9DC48 Gm13502-201ENSMUST00000121574 684 ntBASIC2.72□□□□□ -1.97
Cdc40Q9DC48 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Cdc40Q9DC48 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Cdc40Q9DC48 Gm24969-201ENSMUST00000180331 79 ntBASIC2.72□□□□□ -1.97
Cdc40Q9DC48 Gm28628-201ENSMUST00000187006 264 ntBASIC2.72□□□□□ -1.97
Cdc40Q9DC48 Gm28629-201ENSMUST00000187309 263 ntBASIC2.72□□□□□ -1.97
Cdc40Q9DC48 Gm37979-201ENSMUST00000193065 712 ntBASIC2.72□□□□□ -1.97
Cdc40Q9DC48 Gm9632-201ENSMUST00000195934 643 ntBASIC2.72□□□□□ -1.97
Cdc40Q9DC48 Gm5551-201ENSMUST00000199720 690 ntBASIC2.72□□□□□ -1.97
Cdc40Q9DC48 Gm6012-201ENSMUST00000210821 730 ntBASIC2.72□□□□□ -1.97
Cdc40Q9DC48 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC2.72□□□□□ -1.97
Cdc40Q9DC48 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Cdc40Q9DC48 Mir184-201ENSMUST00000083662 69 ntBASIC2.72□□□□□ -1.97
Cdc40Q9DC48 Gm23104-201ENSMUST00000083722 104 ntBASIC2.72□□□□□ -1.97
Cdc40Q9DC48 Gm24817-201ENSMUST00000093672 105 ntBASIC2.72□□□□□ -1.97
Cdc40Q9DC48 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Cdc40Q9DC48 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Cdc40Q9DC48 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.72□□□□□ -1.97
Cdc40Q9DC48 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
Cdc40Q9DC48 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm13329-201ENSMUST00000117063 265 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm9850-201ENSMUST00000117916 227 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm2066-201ENSMUST00000118046 389 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm2318-201ENSMUST00000119623 639 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm16053-201ENSMUST00000120511 188 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm2005-201ENSMUST00000120759 542 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm22957-201ENSMUST00000122511 123 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm6265-201ENSMUST00000149263 231 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm22225-201ENSMUST00000157358 278 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm24958-201ENSMUST00000158009 97 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm22839-201ENSMUST00000158436 304 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm17038-201ENSMUST00000166586 494 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm7438-201ENSMUST00000177664 639 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Mir5123-201ENSMUST00000177794 83 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm7408-201ENSMUST00000178014 639 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm7386-201ENSMUST00000178020 639 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm3657-201ENSMUST00000178170 639 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm7415-201ENSMUST00000178205 639 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm7398-201ENSMUST00000178589 639 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm7391-201ENSMUST00000178680 639 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm7375-201ENSMUST00000179232 639 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm3681-201ENSMUST00000179940 639 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm27700-201ENSMUST00000185003 81 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Nras-ps2-201ENSMUST00000195269 178 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm18551-201ENSMUST00000195594 642 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm42465-201ENSMUST00000197036 492 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm45105-201ENSMUST00000207824 397 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Gm19540-201ENSMUST00000221843 810 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Cdc40Q9DC48 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
Cdc40Q9DC48 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Cdc40Q9DC48 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
Cdc40Q9DC48 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Cdc40Q9DC48 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Cdc40Q9DC48 Gm22658-201ENSMUST00000104196 155 ntBASIC2.7□□□□□ -1.98
Cdc40Q9DC48 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Cdc40Q9DC48 Gm8260-201ENSMUST00000119230 353 ntBASIC2.7□□□□□ -1.98
Cdc40Q9DC48 Gm14939-201ENSMUST00000120347 680 ntBASIC2.7□□□□□ -1.98
Cdc40Q9DC48 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.7□□□□□ -1.98
Cdc40Q9DC48 Mup-ps13-201ENSMUST00000120662 545 ntBASIC2.7□□□□□ -1.98
Cdc40Q9DC48 Mup-ps1-201ENSMUST00000120720 544 ntBASIC2.7□□□□□ -1.98
Cdc40Q9DC48 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Cdc40Q9DC48 Gm15279-201ENSMUST00000155593 288 ntBASIC2.7□□□□□ -1.98
Cdc40Q9DC48 Gm25981-201ENSMUST00000157921 295 ntBASIC2.7□□□□□ -1.98
Cdc40Q9DC48 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Cdc40Q9DC48 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.7□□□□□ -1.98
Cdc40Q9DC48 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC2.7□□□□□ -1.98
Cdc40Q9DC48 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC2.7□□□□□ -1.98
Cdc40Q9DC48 Gm25026-201ENSMUST00000175017 188 ntBASIC2.7□□□□□ -1.98
Cdc40Q9DC48 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Cdc40Q9DC48 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.7□□□□□ -1.98
Cdc40Q9DC48 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.7□□□□□ -1.98
Cdc40Q9DC48 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC2.7□□□□□ -1.98
Cdc40Q9DC48 Gm44520-201ENSMUST00000205447 802 ntBASIC2.7□□□□□ -1.98
Cdc40Q9DC48 Gm46233-201ENSMUST00000217831 449 ntBASIC2.7□□□□□ -1.98
Cdc40Q9DC48 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC2.7□□□□□ -1.98
Cdc40Q9DC48 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.7□□□□□ -1.98
Cdc40Q9DC48 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.7□□□□□ -1.98
Cdc40Q9DC48 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms