Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm15142-201ENSMUST00000121013 856 ntBASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Snrpert-201ENSMUST00000121967 279 ntBASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Gm12819-201ENSMUST00000122223 629 ntBASIC3.47□□□□□ -1.85
Smc1aQ9CU62 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Gm1989-201ENSMUST00000126244 636 ntBASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Gm22532-201ENSMUST00000158822 140 ntBASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Gm29330-201ENSMUST00000190032 699 ntBASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Gm28098-201ENSMUST00000191361 699 ntBASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Mir703-201ENSMUST00000197105 109 ntBASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Gm43979-201ENSMUST00000203179 475 ntBASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Gm44718-201ENSMUST00000206886 359 ntBASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Smc1aQ9CU62 AC159476.2-201ENSMUST00000216221 418 ntBASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Gm18026-201ENSMUST00000222789 727 ntBASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Gm23738-201ENSMUST00000082828 171 ntBASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
Smc1aQ9CU62 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.46□□□□□ -1.85
Smc1aQ9CU62 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Gm24119-201ENSMUST00000103979 246 ntBASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Gm11253-201ENSMUST00000118486 201 ntBASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Gm22957-201ENSMUST00000122511 123 ntBASIC3.46□□□□□ -1.86
Smc1aQ9CU62 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Gm14389-201ENSMUST00000140453 241 ntBASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Gm16236-201ENSMUST00000159588 379 ntBASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Gm20450-201ENSMUST00000173652 147 ntBASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Gm27783-201ENSMUST00000183534 105 ntBASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Gm28282-201ENSMUST00000186072 186 ntBASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Gm29460-201ENSMUST00000188607 714 ntBASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Gm37281-201ENSMUST00000192412 439 ntBASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Gm44395-201ENSMUST00000197056 153 ntBASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Gm17911-201ENSMUST00000210806 877 ntBASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Gm45696-201ENSMUST00000212088 985 ntBASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.46□□□□□ -1.86
Smc1aQ9CU62 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.46□□□□□ -1.86
Smc1aQ9CU62 AC154594.1-201ENSMUST00000225171 1273 ntBASIC3.46□□□□□ -1.86
Smc1aQ9CU62 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Gm7648-201ENSMUST00000173036 1658 ntBASIC3.46□□□□□ -1.86
Smc1aQ9CU62 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Smc1aQ9CU62 Gm42721-201ENSMUST00000197165 1523 ntBASIC3.45□□□□□ -1.86
Smc1aQ9CU62 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.45□□□□□ -1.86
Smc1aQ9CU62 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Smc1aQ9CU62 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Smc1aQ9CU62 Gm23463-201ENSMUST00000122468 99 ntBASIC3.45□□□□□ -1.86
Smc1aQ9CU62 Gm4916-201ENSMUST00000126139 642 ntBASIC3.45□□□□□ -1.86
Smc1aQ9CU62 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC3.45□□□□□ -1.86
Smc1aQ9CU62 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.45□□□□□ -1.86
Smc1aQ9CU62 Gm6265-201ENSMUST00000149263 231 ntBASIC3.45□□□□□ -1.86
Smc1aQ9CU62 Gm22225-201ENSMUST00000157358 278 ntBASIC3.45□□□□□ -1.86
Smc1aQ9CU62 Gm25373-201ENSMUST00000158156 115 ntBASIC3.45□□□□□ -1.86
Smc1aQ9CU62 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
Smc1aQ9CU62 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.45□□□□□ -1.86
Smc1aQ9CU62 Gm32447-201ENSMUST00000194265 697 ntBASIC3.45□□□□□ -1.86
Smc1aQ9CU62 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.45□□□□□ -1.86
Smc1aQ9CU62 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Smc1aQ9CU62 Gm43232-201ENSMUST00000201346 364 ntBASIC3.45□□□□□ -1.86
Smc1aQ9CU62 Gm45192-201ENSMUST00000206749 283 ntBASIC3.45□□□□□ -1.86
Smc1aQ9CU62 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.45□□□□□ -1.86
Smc1aQ9CU62 Gm4921-201ENSMUST00000219804 992 ntBASIC3.45□□□□□ -1.86
Smc1aQ9CU62 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Smc1aQ9CU62 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Smc1aQ9CU62 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Smc1aQ9CU62 Gm23136-201ENSMUST00000083425 99 ntBASIC3.45□□□□□ -1.86
Smc1aQ9CU62 Gm42479-201ENSMUST00000198654 1356 ntBASIC3.45□□□□□ -1.86
Smc1aQ9CU62 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
Smc1aQ9CU62 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.44□□□□□ -1.86
Smc1aQ9CU62 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.44□□□□□ -1.86
Smc1aQ9CU62 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
Smc1aQ9CU62 Gm14404-201ENSMUST00000119117 1660 ntBASIC3.44□□□□□ -1.86
Smc1aQ9CU62 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.44□□□□□ -1.86
Smc1aQ9CU62 Gm16021-201ENSMUST00000121176 219 ntBASIC3.44□□□□□ -1.86
Smc1aQ9CU62 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.44□□□□□ -1.86
Smc1aQ9CU62 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC3.44□□□□□ -1.86
Smc1aQ9CU62 Gm22722-201ENSMUST00000157467 132 ntBASIC3.44□□□□□ -1.86
Smc1aQ9CU62 Gm22833-201ENSMUST00000158292 132 ntBASIC3.44□□□□□ -1.86
Smc1aQ9CU62 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Smc1aQ9CU62 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC3.44□□□□□ -1.86
Smc1aQ9CU62 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Smc1aQ9CU62 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Smc1aQ9CU62 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.44□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms