Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm22580-201ENSMUST00000083727 107 ntBASIC5.1□□□□□ -1.59
Clp1Q99LI9 Gm24260-201ENSMUST00000083741 107 ntBASIC5.1□□□□□ -1.59
Clp1Q99LI9 Gm23732-201ENSMUST00000083751 107 ntBASIC5.1□□□□□ -1.59
Clp1Q99LI9 Gm22682-201ENSMUST00000083854 107 ntBASIC5.1□□□□□ -1.59
Clp1Q99LI9 Gm25869-201ENSMUST00000083855 107 ntBASIC5.1□□□□□ -1.59
Clp1Q99LI9 Gm24693-201ENSMUST00000083885 107 ntBASIC5.1□□□□□ -1.59
Clp1Q99LI9 Gm26317-201ENSMUST00000083894 107 ntBASIC5.1□□□□□ -1.59
Clp1Q99LI9 Gm22352-201ENSMUST00000083917 107 ntBASIC5.1□□□□□ -1.59
Clp1Q99LI9 Gm24448-201ENSMUST00000083979 107 ntBASIC5.1□□□□□ -1.59
Clp1Q99LI9 Gm22798-201ENSMUST00000083992 107 ntBASIC5.1□□□□□ -1.59
Clp1Q99LI9 Gm26427-201ENSMUST00000093648 107 ntBASIC5.1□□□□□ -1.59
Clp1Q99LI9 Gm22886-201ENSMUST00000093714 107 ntBASIC5.1□□□□□ -1.59
Clp1Q99LI9 Gm22170-201ENSMUST00000097247 107 ntBASIC5.1□□□□□ -1.59
Clp1Q99LI9 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.1□□□□□ -1.59
Clp1Q99LI9 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.1□□□□□ -1.59
Clp1Q99LI9 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Clp1Q99LI9 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Clp1Q99LI9 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Clp1Q99LI9 Gm42494-201ENSMUST00000196515 3051 ntBASIC5.1□□□□□ -1.59
Clp1Q99LI9 Gm7957-201ENSMUST00000207404 2602 ntBASIC5.1□□□□□ -1.59
Clp1Q99LI9 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC5.09□□□□□ -1.59
Clp1Q99LI9 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
Clp1Q99LI9 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Clp1Q99LI9 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Clp1Q99LI9 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Clp1Q99LI9 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Clp1Q99LI9 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Clp1Q99LI9 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Clp1Q99LI9 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Clp1Q99LI9 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
Clp1Q99LI9 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
Clp1Q99LI9 Gm11693-201ENSMUST00000119625 565 ntBASIC5.09□□□□□ -1.59
Clp1Q99LI9 Gm14875-201ENSMUST00000120881 319 ntBASIC5.09□□□□□ -1.59
Clp1Q99LI9 Gm13132-201ENSMUST00000121194 472 ntBASIC5.09□□□□□ -1.59
Clp1Q99LI9 Gm11384-201ENSMUST00000121376 303 ntBASIC5.09□□□□□ -1.59
Clp1Q99LI9 Gm12087-201ENSMUST00000121878 258 ntBASIC5.09□□□□□ -1.59
Clp1Q99LI9 Gm17109-201ENSMUST00000163985 358 ntBASIC5.09□□□□□ -1.59
Clp1Q99LI9 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Clp1Q99LI9 Gm29397-201ENSMUST00000185205 333 ntBASIC5.09□□□□□ -1.59
Clp1Q99LI9 Gm9696-202ENSMUST00000191541 830 ntBASIC5.09□□□□□ -1.59
Clp1Q99LI9 Gm7182-201ENSMUST00000193351 732 ntBASIC5.09□□□□□ -1.59
Clp1Q99LI9 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.09□□□□□ -1.59
Clp1Q99LI9 Gm43284-201ENSMUST00000200103 253 ntBASIC5.09□□□□□ -1.59
Clp1Q99LI9 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Clp1Q99LI9 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC5.09□□□□□ -1.59
Clp1Q99LI9 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC5.09□□□□□ -1.59
Clp1Q99LI9 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC5.09□□□□□ -1.59
Clp1Q99LI9 AC140477.1-201ENSMUST00000222354 246 ntBASIC5.09□□□□□ -1.59
Clp1Q99LI9 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC5.09□□□□□ -1.59
Clp1Q99LI9 Snord14e-201ENSMUST00000082857 90 ntBASIC5.09□□□□□ -1.59
Clp1Q99LI9 Gm23464-201ENSMUST00000083145 147 ntBASIC5.09□□□□□ -1.59
Clp1Q99LI9 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Clp1Q99LI9 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Clp1Q99LI9 Gm44925-201ENSMUST00000208879 2110 ntBASIC5.09□□□□□ -1.59
Clp1Q99LI9 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Clp1Q99LI9 Gm45131-201ENSMUST00000208051 2582 ntBASIC5.09□□□□□ -1.6
Clp1Q99LI9 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.6
Clp1Q99LI9 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.6
Clp1Q99LI9 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Clp1Q99LI9 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Clp1Q99LI9 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Clp1Q99LI9 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Clp1Q99LI9 Gm38069-201ENSMUST00000195360 2144 ntBASIC5.08□□□□□ -1.6
Clp1Q99LI9 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Clp1Q99LI9 Mir701-201ENSMUST00000102208 109 ntBASIC5.08□□□□□ -1.6
Clp1Q99LI9 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Clp1Q99LI9 Gm23273-201ENSMUST00000104058 135 ntBASIC5.08□□□□□ -1.6
Clp1Q99LI9 Gm15010-201ENSMUST00000117153 407 ntBASIC5.08□□□□□ -1.6
Clp1Q99LI9 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC5.08□□□□□ -1.6
Clp1Q99LI9 Gm11794-201ENSMUST00000119446 237 ntBASIC5.08□□□□□ -1.6
Clp1Q99LI9 Gm14841-201ENSMUST00000121067 758 ntBASIC5.08□□□□□ -1.6
Clp1Q99LI9 Gm24371-201ENSMUST00000122662 267 ntBASIC5.08□□□□□ -1.6
Clp1Q99LI9 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Clp1Q99LI9 Gm25967-201ENSMUST00000157168 147 ntBASIC5.08□□□□□ -1.6
Clp1Q99LI9 Gm27579-201ENSMUST00000158113 63 ntBASIC5.08□□□□□ -1.6
Clp1Q99LI9 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Clp1Q99LI9 Gm27883-201ENSMUST00000183941 102 ntBASIC5.08□□□□□ -1.6
Clp1Q99LI9 Mir6418-201ENSMUST00000185075 115 ntBASIC5.08□□□□□ -1.6
Clp1Q99LI9 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.08□□□□□ -1.6
Clp1Q99LI9 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Clp1Q99LI9 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC5.08□□□□□ -1.6
Clp1Q99LI9 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC5.08□□□□□ -1.6
Clp1Q99LI9 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC5.08□□□□□ -1.6
Clp1Q99LI9 Gm34073-201ENSMUST00000195736 212 ntBASIC5.08□□□□□ -1.6
Clp1Q99LI9 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC5.08□□□□□ -1.6
Clp1Q99LI9 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.08□□□□□ -1.6
Clp1Q99LI9 Gm34091-201ENSMUST00000200875 604 ntBASIC5.08□□□□□ -1.6
Clp1Q99LI9 Gm8940-201ENSMUST00000212585 219 ntBASIC5.08□□□□□ -1.6
Clp1Q99LI9 Gm45815-201ENSMUST00000220241 146 ntBASIC5.08□□□□□ -1.6
Clp1Q99LI9 Gm18441-201ENSMUST00000223539 617 ntBASIC5.08□□□□□ -1.6
Clp1Q99LI9 AC154276.2-201ENSMUST00000227707 309 ntBASIC5.08□□□□□ -1.6
Clp1Q99LI9 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.08□□□□□ -1.6
Clp1Q99LI9 Gm24042-201ENSMUST00000083114 103 ntBASIC5.08□□□□□ -1.6
Clp1Q99LI9 Rny1-201ENSMUST00000083767 112 ntBASIC5.08□□□□□ -1.6
Clp1Q99LI9 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Clp1Q99LI9 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Clp1Q99LI9 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Clp1Q99LI9 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Clp1Q99LI9 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Clp1Q99LI9 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms