Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Mir3473f-201ENSMUST00000183743 136 ntBASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 Gm28390-201ENSMUST00000185212 700 ntBASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 Gm28474-201ENSMUST00000188501 315 ntBASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 Gm28788-201ENSMUST00000189717 375 ntBASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 Gm29558-201ENSMUST00000190134 375 ntBASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 Gm37313-201ENSMUST00000191673 290 ntBASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 Gm32447-201ENSMUST00000194265 697 ntBASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 Gm9379-201ENSMUST00000196790 646 ntBASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 Gm35702-201ENSMUST00000198653 511 ntBASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 Gm29920-201ENSMUST00000206876 754 ntBASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 Gm6112-201ENSMUST00000208037 629 ntBASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 Gm18015-201ENSMUST00000214879 316 ntBASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 AC124433.2-201ENSMUST00000223867 291 ntBASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 Gm9845-201ENSMUST00000056409 598 ntBASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 Gm22364-201ENSMUST00000083097 98 ntBASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 n-R5s86-201ENSMUST00000083215 119 ntBASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 Gm23097-201ENSMUST00000083448 105 ntBASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 Mir383-201ENSMUST00000083523 70 ntBASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 Gm24254-201ENSMUST00000083702 104 ntBASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 Gm42675-201ENSMUST00000197552 4035 ntBASIC4.37□□□□□ -1.71
Ccdc9Q8VC31 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Snora64-201ENSMUST00000104521 134 ntBASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Mir1198-201ENSMUST00000116995 121 ntBASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Gm9850-201ENSMUST00000117916 227 ntBASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Gm8260-201ENSMUST00000119230 353 ntBASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Gm15266-201ENSMUST00000119635 255 ntBASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Gm13482-201ENSMUST00000119842 254 ntBASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Gm15899-201ENSMUST00000128586 238 ntBASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Gm23754-201ENSMUST00000157576 63 ntBASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Gm24537-201ENSMUST00000157950 102 ntBASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Gm25555-201ENSMUST00000158078 111 ntBASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Gm24905-201ENSMUST00000158129 104 ntBASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Gm23024-201ENSMUST00000158770 292 ntBASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Mir3070b-201ENSMUST00000175205 89 ntBASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Mir7074-201ENSMUST00000183884 63 ntBASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Mir6537-201ENSMUST00000184150 110 ntBASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Gm38098-201ENSMUST00000194115 241 ntBASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Gm17951-201ENSMUST00000198536 496 ntBASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Gm35857-201ENSMUST00000212739 178 ntBASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Gm5023-201ENSMUST00000217442 587 ntBASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 AC101984.1-201ENSMUST00000219639 402 ntBASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 AC239878.1-201ENSMUST00000224212 506 ntBASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Gm23928-201ENSMUST00000082469 145 ntBASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Gm24144-201ENSMUST00000082632 111 ntBASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Gm42755-201ENSMUST00000198533 1493 ntBASIC4.36□□□□□ -1.71
Ccdc9Q8VC31 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Snord66-201ENSMUST00000104051 75 ntBASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Gm23178-201ENSMUST00000116782 95 ntBASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Gm15076-201ENSMUST00000117076 474 ntBASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Gm12173-201ENSMUST00000117622 273 ntBASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Gm11253-201ENSMUST00000118486 201 ntBASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Gm15988-201ENSMUST00000118677 367 ntBASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Gm9119-201ENSMUST00000118866 495 ntBASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Gm13273-201ENSMUST00000119737 159 ntBASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Gm11522-201ENSMUST00000120533 176 ntBASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Gm14638-201ENSMUST00000121338 216 ntBASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Gm15885-201ENSMUST00000122114 388 ntBASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Gm13368-201ENSMUST00000122443 430 ntBASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Gm25177-201ENSMUST00000122634 117 ntBASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Gm22219-201ENSMUST00000157562 319 ntBASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Gm27828-201ENSMUST00000184108 119 ntBASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Gm28404-201ENSMUST00000190242 453 ntBASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Gm43115-201ENSMUST00000196244 160 ntBASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Gm4644-201ENSMUST00000197587 400 ntBASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Gm18602-201ENSMUST00000209794 851 ntBASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Gm34005-201ENSMUST00000215834 282 ntBASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 AC140930.4-201ENSMUST00000220750 150 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms