Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Mir6996-201ENSMUST00000183922 61 ntBASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Gm27952-201ENSMUST00000184748 105 ntBASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Gm28283-201ENSMUST00000185509 178 ntBASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Gm38044-201ENSMUST00000192964 487 ntBASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Gm37404-201ENSMUST00000195726 359 ntBASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Gm43238-201ENSMUST00000196463 359 ntBASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Gm4644-201ENSMUST00000197587 400 ntBASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Gm29774-201ENSMUST00000219270 436 ntBASIC4.5□□□□□ -1.69
Ushbp1Q8R370 AC163646.2-201ENSMUST00000227962 141 ntBASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Ushbp1Q8R370 n-R5s94-201ENSMUST00000082573 119 ntBASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Mir19a-201ENSMUST00000083482 82 ntBASIC4.5□□□□□ -1.69
Ushbp1Q8R370 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Ushbp1Q8R370 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Ushbp1Q8R370 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Gm17976-201ENSMUST00000184037 1909 ntBASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Gm14558-201ENSMUST00000117458 381 ntBASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Gm11854-201ENSMUST00000117839 446 ntBASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Gm12515-201ENSMUST00000120116 361 ntBASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Gm16428-201ENSMUST00000121193 723 ntBASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Gm6079-201ENSMUST00000121356 404 ntBASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Gm14101-201ENSMUST00000121502 473 ntBASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Gm26320-201ENSMUST00000157742 306 ntBASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Gm23144-201ENSMUST00000180226 107 ntBASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Gm19649-201ENSMUST00000201126 822 ntBASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Gm45006-201ENSMUST00000206078 690 ntBASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Gm19219-201ENSMUST00000215863 724 ntBASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Gm5955-201ENSMUST00000222712 219 ntBASIC4.49□□□□□ -1.69
Ushbp1Q8R370 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.49□□□□□ -1.69
Ushbp1Q8R370 AC147633.1-201ENSMUST00000225134 259 ntBASIC4.49□□□□□ -1.69
Ushbp1Q8R370 AC164883.9-201ENSMUST00000228042 399 ntBASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Gm22508-201ENSMUST00000082772 110 ntBASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Gm22740-201ENSMUST00000083439 109 ntBASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Gm37999-201ENSMUST00000195178 1809 ntBASIC4.49□□□□□ -1.69
Ushbp1Q8R370 Gm20172-201ENSMUST00000193138 1551 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Gm23063-201ENSMUST00000102350 93 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Gm25833-201ENSMUST00000104137 133 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Gm25168-201ENSMUST00000104189 132 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Gm22656-201ENSMUST00000104199 171 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Gm15151-201ENSMUST00000117106 177 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Gm14890-201ENSMUST00000117660 676 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Gm7219-201ENSMUST00000119619 297 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4.48□□□□□ -1.69
Ushbp1Q8R370 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Gm26045-201ENSMUST00000157862 97 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Gm16290-201ENSMUST00000161175 474 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Gm4076-201ENSMUST00000179230 965 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Gm10292-201ENSMUST00000183142 581 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Gm27477-201ENSMUST00000184649 143 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Gm27332-201ENSMUST00000184893 112 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Gm43804-201ENSMUST00000198280 456 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC4.48□□□□□ -1.69
Ushbp1Q8R370 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Gm18903-201ENSMUST00000215343 480 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Gm22229-201ENSMUST00000082987 108 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ushbp1Q8R370 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms