Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trim56Q80VI1 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trim56Q80VI1 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim56Q80VI1 Mir297a-2-201ENSMUST00000103795 90 ntBASIC5.1□□□□□ -1.59
Trim56Q80VI1 Gm13439-201ENSMUST00000117541 409 ntBASIC5.1□□□□□ -1.59
Trim56Q80VI1 Gm22718-201ENSMUST00000122701 315 ntBASIC5.1□□□□□ -1.59
Trim56Q80VI1 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC5.1□□□□□ -1.59
Trim56Q80VI1 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.1□□□□□ -1.59
Trim56Q80VI1 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC5.1□□□□□ -1.59
Trim56Q80VI1 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trim56Q80VI1 Gm22059-201ENSMUST00000157544 104 ntBASIC5.1□□□□□ -1.59
Trim56Q80VI1 Gm23902-201ENSMUST00000157571 134 ntBASIC5.1□□□□□ -1.59
Trim56Q80VI1 Gm26373-201ENSMUST00000157833 103 ntBASIC5.1□□□□□ -1.59
Trim56Q80VI1 Gm16490-201ENSMUST00000165299 351 ntBASIC5.1□□□□□ -1.59
Trim56Q80VI1 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC5.1□□□□□ -1.59
Trim56Q80VI1 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trim56Q80VI1 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC5.1□□□□□ -1.59
Trim56Q80VI1 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC5.1□□□□□ -1.59
Trim56Q80VI1 Gm29350-201ENSMUST00000189141 541 ntBASIC5.1□□□□□ -1.59
Trim56Q80VI1 Gm8939-201ENSMUST00000192577 964 ntBASIC5.1□□□□□ -1.59
Trim56Q80VI1 Gm37692-201ENSMUST00000192633 232 ntBASIC5.1□□□□□ -1.59
Trim56Q80VI1 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trim56Q80VI1 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trim56Q80VI1 Gm44032-201ENSMUST00000204841 166 ntBASIC5.1□□□□□ -1.59
Trim56Q80VI1 Gm45032-201ENSMUST00000205375 520 ntBASIC5.1□□□□□ -1.59
Trim56Q80VI1 Gm18462-201ENSMUST00000208112 417 ntBASIC5.1□□□□□ -1.59
Trim56Q80VI1 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC5.1□□□□□ -1.59
Trim56Q80VI1 Gm18320-201ENSMUST00000211304 595 ntBASIC5.1□□□□□ -1.59
Trim56Q80VI1 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC5.1□□□□□ -1.59
Trim56Q80VI1 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC5.1□□□□□ -1.59
Trim56Q80VI1 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trim56Q80VI1 AC150560.2-201ENSMUST00000227208 171 ntBASIC5.1□□□□□ -1.59
Trim56Q80VI1 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim56Q80VI1 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim56Q80VI1 Gm23510-201ENSMUST00000083083 163 ntBASIC5.1□□□□□ -1.59
Trim56Q80VI1 Mir452-201ENSMUST00000093629 85 ntBASIC5.1□□□□□ -1.59
Trim56Q80VI1 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
Trim56Q80VI1 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim56Q80VI1 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim56Q80VI1 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trim56Q80VI1 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim56Q80VI1 Gm43736-201ENSMUST00000196377 2281 ntBASIC5.09□□□□□ -1.59
Trim56Q80VI1 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trim56Q80VI1 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Trim56Q80VI1 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trim56Q80VI1 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trim56Q80VI1 Gm25726-201ENSMUST00000104529 129 ntBASIC5.09□□□□□ -1.59
Trim56Q80VI1 Gm13550-201ENSMUST00000118185 525 ntBASIC5.09□□□□□ -1.59
Trim56Q80VI1 Gm8217-201ENSMUST00000119136 465 ntBASIC5.09□□□□□ -1.59
Trim56Q80VI1 Gm13518-201ENSMUST00000120018 233 ntBASIC5.09□□□□□ -1.59
Trim56Q80VI1 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trim56Q80VI1 Gm24577-201ENSMUST00000158580 63 ntBASIC5.09□□□□□ -1.59
Trim56Q80VI1 Gm22891-201ENSMUST00000158641 164 ntBASIC5.09□□□□□ -1.59
Trim56Q80VI1 Gm17119-201ENSMUST00000163943 280 ntBASIC5.09□□□□□ -1.59
Trim56Q80VI1 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC5.09□□□□□ -1.59
Trim56Q80VI1 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC5.09□□□□□ -1.59
Trim56Q80VI1 Gm44543-201ENSMUST00000209136 396 ntBASIC5.09□□□□□ -1.59
Trim56Q80VI1 Gm45365-201ENSMUST00000209489 256 ntBASIC5.09□□□□□ -1.59
Trim56Q80VI1 AC165092.3-201ENSMUST00000223602 282 ntBASIC5.09□□□□□ -1.59
Trim56Q80VI1 CT025536.1-201ENSMUST00000226744 844 ntBASIC5.09□□□□□ -1.59
Trim56Q80VI1 Mir26a-2-201ENSMUST00000083496 84 ntBASIC5.09□□□□□ -1.59
Trim56Q80VI1 Mir383-201ENSMUST00000083523 70 ntBASIC5.09□□□□□ -1.59
Trim56Q80VI1 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trim56Q80VI1 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trim56Q80VI1 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trim56Q80VI1 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
Trim56Q80VI1 Gm3972-201ENSMUST00000173960 2861 ntBASIC5.09□□□□□ -1.6
Trim56Q80VI1 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC5.09□□□□□ -1.6
Trim56Q80VI1 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trim56Q80VI1 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim56Q80VI1 BC051076-202ENSMUST00000199477 2868 ntBASIC5.08□□□□□ -1.6
Trim56Q80VI1 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trim56Q80VI1 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trim56Q80VI1 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trim56Q80VI1 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim56Q80VI1 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.08□□□□□ -1.6
Trim56Q80VI1 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim56Q80VI1 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC5.08□□□□□ -1.6
Trim56Q80VI1 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trim56Q80VI1 Gm23178-201ENSMUST00000116782 95 ntBASIC5.08□□□□□ -1.6
Trim56Q80VI1 Snord98-201ENSMUST00000116819 65 ntBASIC5.08□□□□□ -1.6
Trim56Q80VI1 Gm14868-201ENSMUST00000117840 216 ntBASIC5.08□□□□□ -1.6
Trim56Q80VI1 Gm13880-201ENSMUST00000118421 474 ntBASIC5.08□□□□□ -1.6
Trim56Q80VI1 Gm15120-201ENSMUST00000120602 301 ntBASIC5.08□□□□□ -1.6
Trim56Q80VI1 Gm12087-201ENSMUST00000121878 258 ntBASIC5.08□□□□□ -1.6
Trim56Q80VI1 Gm12693-201ENSMUST00000121965 483 ntBASIC5.08□□□□□ -1.6
Trim56Q80VI1 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC5.08□□□□□ -1.6
Trim56Q80VI1 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC5.08□□□□□ -1.6
Trim56Q80VI1 Gm22849-201ENSMUST00000157713 307 ntBASIC5.08□□□□□ -1.6
Trim56Q80VI1 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim56Q80VI1 Gm24819-201ENSMUST00000175094 166 ntBASIC5.08□□□□□ -1.6
Trim56Q80VI1 Gm19498-201ENSMUST00000191128 331 ntBASIC5.08□□□□□ -1.6
Trim56Q80VI1 Ighv2-8-201ENSMUST00000193935 262 ntBASIC5.08□□□□□ -1.6
Trim56Q80VI1 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC5.08□□□□□ -1.6
Trim56Q80VI1 Gm43586-201ENSMUST00000195948 310 ntBASIC5.08□□□□□ -1.6
Trim56Q80VI1 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC5.08□□□□□ -1.6
Trim56Q80VI1 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC5.08□□□□□ -1.6
Trim56Q80VI1 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC5.08□□□□□ -1.6
Trim56Q80VI1 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC5.08□□□□□ -1.6
Trim56Q80VI1 Gm19786-201ENSMUST00000222589 580 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms