Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm26396-201ENSMUST00000104093 132 ntBASIC4.78□□□□□ -1.64
Trim28Q62318 Gm13331-201ENSMUST00000117500 448 ntBASIC4.78□□□□□ -1.64
Trim28Q62318 Gm23792-201ENSMUST00000122557 93 ntBASIC4.78□□□□□ -1.64
Trim28Q62318 Gm25428-201ENSMUST00000157608 114 ntBASIC4.78□□□□□ -1.64
Trim28Q62318 Gm24314-201ENSMUST00000158274 123 ntBASIC4.78□□□□□ -1.64
Trim28Q62318 Gm21960-201ENSMUST00000181924 452 ntBASIC4.78□□□□□ -1.64
Trim28Q62318 Mir6408-201ENSMUST00000183643 91 ntBASIC4.78□□□□□ -1.64
Trim28Q62318 Mir7047-201ENSMUST00000184595 64 ntBASIC4.78□□□□□ -1.64
Trim28Q62318 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC4.78□□□□□ -1.64
Trim28Q62318 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim28Q62318 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC4.78□□□□□ -1.64
Trim28Q62318 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC4.78□□□□□ -1.64
Trim28Q62318 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.78□□□□□ -1.64
Trim28Q62318 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim28Q62318 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim28Q62318 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim28Q62318 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Trim28Q62318 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim28Q62318 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Trim28Q62318 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Trim28Q62318 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Trim28Q62318 Gm37064-201ENSMUST00000193851 2231 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Trim28Q62318 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Trim28Q62318 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Trim28Q62318 Gm23424-201ENSMUST00000103889 110 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 Gm14987-201ENSMUST00000117820 676 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 Gm14972-201ENSMUST00000121780 364 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC4.77□□□□□ -1.65
Trim28Q62318 Gm24901-201ENSMUST00000158125 110 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 Gm25835-201ENSMUST00000158917 144 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC4.77□□□□□ -1.65
Trim28Q62318 Gm22584-201ENSMUST00000177935 92 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC4.77□□□□□ -1.65
Trim28Q62318 Gm21809-201ENSMUST00000178495 468 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Trim28Q62318 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC4.77□□□□□ -1.65
Trim28Q62318 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC4.77□□□□□ -1.65
Trim28Q62318 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC4.77□□□□□ -1.65
Trim28Q62318 Gm17412-201ENSMUST00000179261 468 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 Gm22951-201ENSMUST00000179471 107 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC4.77□□□□□ -1.65
Trim28Q62318 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC4.77□□□□□ -1.65
Trim28Q62318 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC4.77□□□□□ -1.65
Trim28Q62318 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Trim28Q62318 Gm25873-201ENSMUST00000180317 107 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Trim28Q62318 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC4.77□□□□□ -1.65
Trim28Q62318 Gm5829-201ENSMUST00000191383 351 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 Gm38234-201ENSMUST00000195204 421 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 Gm44041-201ENSMUST00000203678 396 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 Gm44295-201ENSMUST00000203805 437 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 Gm44794-201ENSMUST00000206550 411 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 Gm44655-201ENSMUST00000207768 423 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 Gm45814-201ENSMUST00000212646 775 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Trim28Q62318 Gm6462-201ENSMUST00000081488 304 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 Gm22265-201ENSMUST00000082947 116 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 Gm25401-201ENSMUST00000082975 106 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 Gm26056-201ENSMUST00000083043 104 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 Mir99a-201ENSMUST00000083596 65 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Trim28Q62318 Gm43924-201ENSMUST00000204851 1736 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
Trim28Q62318 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.77□□□□□ -1.65
Trim28Q62318 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Trim28Q62318 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Trim28Q62318 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Trim28Q62318 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Trim28Q62318 Gm24715-201ENSMUST00000102377 95 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 Gm25272-201ENSMUST00000104293 128 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Trim28Q62318 Gm12891-201ENSMUST00000119358 240 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 Gm12876-201ENSMUST00000120975 408 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 Gm12095-201ENSMUST00000121962 816 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 Gm23214-201ENSMUST00000122716 157 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 Defb44-ps-201ENSMUST00000126871 219 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC4.76□□□□□ -1.65
Trim28Q62318 Gm23579-201ENSMUST00000158528 103 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 Gm15974-201ENSMUST00000159103 531 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 Gm6264-202ENSMUST00000162896 1217 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC4.76□□□□□ -1.65
Trim28Q62318 Gm8807-201ENSMUST00000179328 492 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 Gm24415-201ENSMUST00000180218 107 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.76□□□□□ -1.65
Trim28Q62318 Gm37743-201ENSMUST00000194645 376 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 Gm8747-201ENSMUST00000195392 751 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 Ighv12-1-201ENSMUST00000195542 329 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 Gm43494-201ENSMUST00000197672 388 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 Gm18423-201ENSMUST00000205144 1074 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 AC153141.1-201ENSMUST00000218636 501 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC4.76□□□□□ -1.65
Trim28Q62318 AC134468.2-201ENSMUST00000222549 672 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 AC154257.2-201ENSMUST00000224166 340 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 AC126275.2-201ENSMUST00000225224 253 ntBASIC4.76□□□□□ -1.65
Trim28Q62318 AC154467.1-201ENSMUST00000227527 449 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 104.1 ms