Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.85□□□□□ -2.11
Trav6d-4Q5R1I0 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Trav6d-4Q5R1I0 Gm6113-201ENSMUST00000180319 639 ntBASIC1.85□□□□□ -2.11
Trav6d-4Q5R1I0 Igkv12-49-201ENSMUST00000197714 278 ntBASIC1.85□□□□□ -2.11
Trav6d-4Q5R1I0 Gm44844-201ENSMUST00000207242 336 ntBASIC1.85□□□□□ -2.11
Trav6d-4Q5R1I0 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC1.85□□□□□ -2.11
Trav6d-4Q5R1I0 Gm45742-201ENSMUST00000212400 433 ntBASIC1.85□□□□□ -2.11
Trav6d-4Q5R1I0 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trav6d-4Q5R1I0 AC158536.1-201ENSMUST00000222510 256 ntBASIC1.85□□□□□ -2.11
Trav6d-4Q5R1I0 AC154600.1-201ENSMUST00000226480 714 ntBASIC1.85□□□□□ -2.11
Trav6d-4Q5R1I0 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC1.85□□□□□ -2.11
Trav6d-4Q5R1I0 AC165437.1-201ENSMUST00000228640 536 ntBASIC1.85□□□□□ -2.11
Trav6d-4Q5R1I0 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trav6d-4Q5R1I0 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trav6d-4Q5R1I0 Gm24313-201ENSMUST00000082561 133 ntBASIC1.85□□□□□ -2.11
Trav6d-4Q5R1I0 Gm24661-201ENSMUST00000083205 104 ntBASIC1.85□□□□□ -2.11
Trav6d-4Q5R1I0 Gm43047-201ENSMUST00000200089 3460 ntBASIC1.85□□□□□ -2.11
Trav6d-4Q5R1I0 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Trav6d-4Q5R1I0 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
Trav6d-4Q5R1I0 Gm14885-201ENSMUST00000117969 496 ntBASIC1.84□□□□□ -2.11
Trav6d-4Q5R1I0 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC1.84□□□□□ -2.11
Trav6d-4Q5R1I0 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC1.84□□□□□ -2.11
Trav6d-4Q5R1I0 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC1.84□□□□□ -2.11
Trav6d-4Q5R1I0 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC1.84□□□□□ -2.11
Trav6d-4Q5R1I0 Gm24475-201ENSMUST00000157435 143 ntBASIC1.84□□□□□ -2.11
Trav6d-4Q5R1I0 Gm23642-201ENSMUST00000157858 258 ntBASIC1.84□□□□□ -2.11
Trav6d-4Q5R1I0 Gm16326-201ENSMUST00000162843 414 ntBASIC1.84□□□□□ -2.11
Trav6d-4Q5R1I0 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
Trav6d-4Q5R1I0 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
Trav6d-4Q5R1I0 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Trav6d-4Q5R1I0 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Trav6d-4Q5R1I0 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC1.84□□□□□ -2.11
Trav6d-4Q5R1I0 Gm42438-201ENSMUST00000197832 974 ntBASIC1.84□□□□□ -2.11
Trav6d-4Q5R1I0 Gm18602-201ENSMUST00000209794 851 ntBASIC1.84□□□□□ -2.11
Trav6d-4Q5R1I0 AC147615.1-201ENSMUST00000218914 441 ntBASIC1.84□□□□□ -2.11
Trav6d-4Q5R1I0 AC147545.1-201ENSMUST00000227528 108 ntBASIC1.84□□□□□ -2.11
Trav6d-4Q5R1I0 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Trav6d-4Q5R1I0 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
Trav6d-4Q5R1I0 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trav6d-4Q5R1I0 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
Trav6d-4Q5R1I0 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Trav6d-4Q5R1I0 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Trav6d-4Q5R1I0 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Trav6d-4Q5R1I0 Gm25094-201ENSMUST00000103992 131 ntBASIC1.83□□□□□ -2.12
Trav6d-4Q5R1I0 Gm22486-201ENSMUST00000116815 137 ntBASIC1.83□□□□□ -2.12
Trav6d-4Q5R1I0 Gm14607-201ENSMUST00000119119 491 ntBASIC1.83□□□□□ -2.12
Trav6d-4Q5R1I0 Gm14843-201ENSMUST00000119596 212 ntBASIC1.83□□□□□ -2.12
Trav6d-4Q5R1I0 Gm13627-201ENSMUST00000119700 706 ntBASIC1.83□□□□□ -2.12
Trav6d-4Q5R1I0 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC1.83□□□□□ -2.12
Trav6d-4Q5R1I0 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Trav6d-4Q5R1I0 Gm22227-201ENSMUST00000157356 259 ntBASIC1.83□□□□□ -2.12
Trav6d-4Q5R1I0 Gm24010-201ENSMUST00000157731 282 ntBASIC1.83□□□□□ -2.12
Trav6d-4Q5R1I0 Gm22839-201ENSMUST00000158436 304 ntBASIC1.83□□□□□ -2.12
Trav6d-4Q5R1I0 Gm22666-201ENSMUST00000158717 164 ntBASIC1.83□□□□□ -2.12
Trav6d-4Q5R1I0 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Trav6d-4Q5R1I0 Gm27044-201ENSMUST00000183033 796 ntBASIC1.83□□□□□ -2.12
Trav6d-4Q5R1I0 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC1.83□□□□□ -2.12
Trav6d-4Q5R1I0 Gm2544-201ENSMUST00000222702 756 ntBASIC1.83□□□□□ -2.12
Trav6d-4Q5R1I0 AC117814.1-201ENSMUST00000226135 352 ntBASIC1.83□□□□□ -2.12
Trav6d-4Q5R1I0 AC155167.3-201ENSMUST00000226349 217 ntBASIC1.83□□□□□ -2.12
Trav6d-4Q5R1I0 Gm9762-201ENSMUST00000036976 444 ntBASIC1.83□□□□□ -2.12
Trav6d-4Q5R1I0 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Trav6d-4Q5R1I0 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Trav6d-4Q5R1I0 AC125374.3-201ENSMUST00000214983 2810 ntBASIC1.83□□□□□ -2.12
Trav6d-4Q5R1I0 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
Trav6d-4Q5R1I0 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trav6d-4Q5R1I0 Snord65-201ENSMUST00000104269 72 ntBASIC1.82□□□□□ -2.12
Trav6d-4Q5R1I0 Gm12941-201ENSMUST00000117934 220 ntBASIC1.82□□□□□ -2.12
Trav6d-4Q5R1I0 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Trav6d-4Q5R1I0 Gm7846-201ENSMUST00000145844 274 ntBASIC1.82□□□□□ -2.12
Trav6d-4Q5R1I0 Gm22093-201ENSMUST00000158980 111 ntBASIC1.82□□□□□ -2.12
Trav6d-4Q5R1I0 Mir6353-201ENSMUST00000183596 113 ntBASIC1.82□□□□□ -2.12
Trav6d-4Q5R1I0 Ighv1-68-201ENSMUST00000198789 294 ntBASIC1.82□□□□□ -2.12
Trav6d-4Q5R1I0 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC1.82□□□□□ -2.12
Trav6d-4Q5R1I0 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC1.82□□□□□ -2.12
Trav6d-4Q5R1I0 AC101984.1-201ENSMUST00000219639 402 ntBASIC1.82□□□□□ -2.12
Trav6d-4Q5R1I0 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC1.82□□□□□ -2.12
Trav6d-4Q5R1I0 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Trav6d-4Q5R1I0 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Trav6d-4Q5R1I0 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trav6d-4Q5R1I0 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Trav6d-4Q5R1I0 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Trav6d-4Q5R1I0 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trav6d-4Q5R1I0 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trav6d-4Q5R1I0 Gm10400-201ENSMUST00000203920 3835 ntBASIC1.81□□□□□ -2.12
Trav6d-4Q5R1I0 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trav6d-4Q5R1I0 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trav6d-4Q5R1I0 n-R5s26-201ENSMUST00000104601 122 ntBASIC1.81□□□□□ -2.12
Trav6d-4Q5R1I0 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trav6d-4Q5R1I0 Gm15106-201ENSMUST00000119691 821 ntBASIC1.81□□□□□ -2.12
Trav6d-4Q5R1I0 Gm13273-201ENSMUST00000119737 159 ntBASIC1.81□□□□□ -2.12
Trav6d-4Q5R1I0 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC1.81□□□□□ -2.12
Trav6d-4Q5R1I0 Snora81-201ENSMUST00000157310 178 ntBASIC1.81□□□□□ -2.12
Trav6d-4Q5R1I0 Gm16584-201ENSMUST00000159267 189 ntBASIC1.81□□□□□ -2.12
Trav6d-4Q5R1I0 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC1.81□□□□□ -2.12
Trav6d-4Q5R1I0 Gm21827-201ENSMUST00000178247 423 ntBASIC1.81□□□□□ -2.12
Trav6d-4Q5R1I0 Gm8807-201ENSMUST00000179328 492 ntBASIC1.81□□□□□ -2.12
Trav6d-4Q5R1I0 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC1.81□□□□□ -2.12
Trav6d-4Q5R1I0 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC1.81□□□□□ -2.12
Trav6d-4Q5R1I0 Gm37281-201ENSMUST00000192412 439 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms