Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm16458-201ENSMUST00000121428 502 ntBASIC2.97□□□□□ -1.93
Usp28Q5I043 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
Usp28Q5I043 Gm26411-201ENSMUST00000157668 107 ntBASIC2.97□□□□□ -1.93
Usp28Q5I043 Gm22416-201ENSMUST00000158590 88 ntBASIC2.97□□□□□ -1.93
Usp28Q5I043 Gm25119-201ENSMUST00000158815 88 ntBASIC2.97□□□□□ -1.93
Usp28Q5I043 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Usp28Q5I043 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC2.97□□□□□ -1.93
Usp28Q5I043 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.97□□□□□ -1.93
Usp28Q5I043 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC2.97□□□□□ -1.93
Usp28Q5I043 Gm43142-201ENSMUST00000198670 361 ntBASIC2.97□□□□□ -1.93
Usp28Q5I043 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC2.97□□□□□ -1.93
Usp28Q5I043 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Usp28Q5I043 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC2.97□□□□□ -1.93
Usp28Q5I043 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.97□□□□□ -1.93
Usp28Q5I043 Mir323-201ENSMUST00000083683 86 ntBASIC2.97□□□□□ -1.93
Usp28Q5I043 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Usp28Q5I043 Gm37143-201ENSMUST00000195180 3259 ntBASIC2.97□□□□□ -1.93
Usp28Q5I043 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
Usp28Q5I043 Gm7869-201ENSMUST00000121457 1322 ntBASIC2.96□□□□□ -1.93
Usp28Q5I043 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC2.96□□□□□ -1.94
Usp28Q5I043 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Usp28Q5I043 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.96□□□□□ -1.94
Usp28Q5I043 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Usp28Q5I043 Gm15108-201ENSMUST00000116160 803 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 Gm16017-201ENSMUST00000119834 208 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 Gm14913-201ENSMUST00000120011 1093 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 Gm14238-201ENSMUST00000120227 323 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 Gm13574-201ENSMUST00000120482 394 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 Gm15111-201ENSMUST00000122142 878 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 Gm12819-201ENSMUST00000122223 629 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 Gm24291-201ENSMUST00000157633 162 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC2.96□□□□□ -1.94
Usp28Q5I043 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Usp28Q5I043 Gm3370-201ENSMUST00000171785 500 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 Gm19203-201ENSMUST00000174049 939 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Usp28Q5I043 Gm21638-201ENSMUST00000179473 836 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Usp28Q5I043 Gm25528-201ENSMUST00000180264 132 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 Gm27342-201ENSMUST00000183530 109 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 Mir6363-201ENSMUST00000184880 114 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 Gm28113-201ENSMUST00000188280 229 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC2.96□□□□□ -1.94
Usp28Q5I043 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Usp28Q5I043 Gm28314-201ENSMUST00000191276 345 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 AC153968.2-201ENSMUST00000215579 1140 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC2.96□□□□□ -1.94
Usp28Q5I043 AC154552.4-201ENSMUST00000222171 151 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 AC153646.1-201ENSMUST00000223229 1279 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 AC124569.1-201ENSMUST00000225932 101 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 AC150560.3-201ENSMUST00000227442 455 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 AC164883.9-201ENSMUST00000228042 399 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Usp28Q5I043 Gm26439-201ENSMUST00000082592 106 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Usp28Q5I043 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.96□□□□□ -1.94
Usp28Q5I043 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Usp28Q5I043 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
Usp28Q5I043 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Usp28Q5I043 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
Usp28Q5I043 Gm20541-201ENSMUST00000173035 1406 ntBASIC2.95□□□□□ -1.94
Usp28Q5I043 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Usp28Q5I043 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
Usp28Q5I043 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.95□□□□□ -1.94
Usp28Q5I043 Gm22023-201ENSMUST00000104354 130 ntBASIC2.95□□□□□ -1.94
Usp28Q5I043 Gm22488-201ENSMUST00000116811 127 ntBASIC2.95□□□□□ -1.94
Usp28Q5I043 Gm14518-201ENSMUST00000117351 542 ntBASIC2.95□□□□□ -1.94
Usp28Q5I043 Gm13273-201ENSMUST00000119737 159 ntBASIC2.95□□□□□ -1.94
Usp28Q5I043 Gm22817-201ENSMUST00000157448 356 ntBASIC2.95□□□□□ -1.94
Usp28Q5I043 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC2.95□□□□□ -1.94
Usp28Q5I043 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
Usp28Q5I043 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC2.95□□□□□ -1.94
Usp28Q5I043 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC2.95□□□□□ -1.94
Usp28Q5I043 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.95□□□□□ -1.94
Usp28Q5I043 Gm18727-201ENSMUST00000185981 553 ntBASIC2.95□□□□□ -1.94
Usp28Q5I043 Gm37866-201ENSMUST00000191950 696 ntBASIC2.95□□□□□ -1.94
Usp28Q5I043 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC2.95□□□□□ -1.94
Usp28Q5I043 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Usp28Q5I043 AL929265.1-201ENSMUST00000213427 125 ntBASIC2.95□□□□□ -1.94
Usp28Q5I043 Gm18346-201ENSMUST00000216782 325 ntBASIC2.95□□□□□ -1.94
Usp28Q5I043 Gm30534-201ENSMUST00000217928 207 ntBASIC2.95□□□□□ -1.94
Usp28Q5I043 AC126275.1-201ENSMUST00000224881 446 ntBASIC2.95□□□□□ -1.94
Usp28Q5I043 AC102575.1-201ENSMUST00000225348 547 ntBASIC2.95□□□□□ -1.94
Usp28Q5I043 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.95□□□□□ -1.94
Usp28Q5I043 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.95□□□□□ -1.94
Usp28Q5I043 Gm43404-201ENSMUST00000200424 2534 ntBASIC2.94□□□□□ -1.94
Usp28Q5I043 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Usp28Q5I043 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC2.94□□□□□ -1.94
Usp28Q5I043 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC2.94□□□□□ -1.94
Usp28Q5I043 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Usp28Q5I043 Gm22818-201ENSMUST00000157446 104 ntBASIC2.94□□□□□ -1.94
Usp28Q5I043 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC2.94□□□□□ -1.94
Usp28Q5I043 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC2.94□□□□□ -1.94
Usp28Q5I043 Gm37807-201ENSMUST00000194310 190 ntBASIC2.94□□□□□ -1.94
Usp28Q5I043 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC2.94□□□□□ -1.94
Usp28Q5I043 Gm43848-201ENSMUST00000198060 1247 ntBASIC2.94□□□□□ -1.94
Usp28Q5I043 Gm43669-201ENSMUST00000198229 436 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms