Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm22776-201ENSMUST00000178634 94 ntBASIC2.83□□□□□ -1.96
Upf3bQ3ULL6 Gm23767-201ENSMUST00000179278 94 ntBASIC2.83□□□□□ -1.96
Upf3bQ3ULL6 Gm27379-201ENSMUST00000183730 123 ntBASIC2.83□□□□□ -1.96
Upf3bQ3ULL6 Gm19641-201ENSMUST00000188432 417 ntBASIC2.83□□□□□ -1.96
Upf3bQ3ULL6 Gm37281-201ENSMUST00000192412 439 ntBASIC2.83□□□□□ -1.96
Upf3bQ3ULL6 Gm6321-201ENSMUST00000194460 1090 ntBASIC2.83□□□□□ -1.96
Upf3bQ3ULL6 Gm18346-201ENSMUST00000216782 325 ntBASIC2.83□□□□□ -1.96
Upf3bQ3ULL6 AC192088.2-201ENSMUST00000227590 411 ntBASIC2.83□□□□□ -1.96
Upf3bQ3ULL6 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Upf3bQ3ULL6 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Upf3bQ3ULL6 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Upf3bQ3ULL6 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.82□□□□□ -1.96
Upf3bQ3ULL6 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
Upf3bQ3ULL6 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Upf3bQ3ULL6 Gm14240-201ENSMUST00000120353 546 ntBASIC2.82□□□□□ -1.96
Upf3bQ3ULL6 Gm22416-201ENSMUST00000158590 88 ntBASIC2.82□□□□□ -1.96
Upf3bQ3ULL6 Gm25119-201ENSMUST00000158815 88 ntBASIC2.82□□□□□ -1.96
Upf3bQ3ULL6 Mir6353-201ENSMUST00000183596 113 ntBASIC2.82□□□□□ -1.96
Upf3bQ3ULL6 Gm29597-201ENSMUST00000188035 308 ntBASIC2.82□□□□□ -1.96
Upf3bQ3ULL6 Gm37866-201ENSMUST00000191950 696 ntBASIC2.82□□□□□ -1.96
Upf3bQ3ULL6 Gm37807-201ENSMUST00000194310 190 ntBASIC2.82□□□□□ -1.96
Upf3bQ3ULL6 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC2.82□□□□□ -1.96
Upf3bQ3ULL6 AC159293.2-201ENSMUST00000222289 424 ntBASIC2.82□□□□□ -1.96
Upf3bQ3ULL6 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.82□□□□□ -1.96
Upf3bQ3ULL6 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Upf3bQ3ULL6 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Upf3bQ3ULL6 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Upf3bQ3ULL6 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Upf3bQ3ULL6 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Upf3bQ3ULL6 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Upf3bQ3ULL6 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Upf3bQ3ULL6 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.82□□□□□ -1.96
Upf3bQ3ULL6 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Upf3bQ3ULL6 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.81□□□□□ -1.96
Upf3bQ3ULL6 Gm11414-201ENSMUST00000121795 263 ntBASIC2.81□□□□□ -1.96
Upf3bQ3ULL6 Gm8880-201ENSMUST00000121800 454 ntBASIC2.81□□□□□ -1.96
Upf3bQ3ULL6 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Upf3bQ3ULL6 Gm13901-201ENSMUST00000137252 468 ntBASIC2.81□□□□□ -1.96
Upf3bQ3ULL6 Mir6993-201ENSMUST00000184912 65 ntBASIC2.81□□□□□ -1.96
Upf3bQ3ULL6 Gm18692-201ENSMUST00000193047 511 ntBASIC2.81□□□□□ -1.96
Upf3bQ3ULL6 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.81□□□□□ -1.96
Upf3bQ3ULL6 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Upf3bQ3ULL6 Gm18043-201ENSMUST00000216741 739 ntBASIC2.81□□□□□ -1.96
Upf3bQ3ULL6 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
Upf3bQ3ULL6 Gm23847-201ENSMUST00000083829 110 ntBASIC2.81□□□□□ -1.96
Upf3bQ3ULL6 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Upf3bQ3ULL6 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Upf3bQ3ULL6 Gm14442-201ENSMUST00000119690 1736 ntBASIC2.81□□□□□ -1.96
Upf3bQ3ULL6 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.81□□□□□ -1.96
Upf3bQ3ULL6 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Upf3bQ3ULL6 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Upf3bQ3ULL6 Gm16436-201ENSMUST00000121510 1607 ntBASIC2.8□□□□□ -1.96
Upf3bQ3ULL6 Gm25728-201ENSMUST00000104525 159 ntBASIC2.8□□□□□ -1.96
Upf3bQ3ULL6 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Upf3bQ3ULL6 Gm12213-201ENSMUST00000119924 353 ntBASIC2.8□□□□□ -1.96
Upf3bQ3ULL6 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.8□□□□□ -1.96
Upf3bQ3ULL6 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Upf3bQ3ULL6 Gm26041-201ENSMUST00000158148 108 ntBASIC2.8□□□□□ -1.96
Upf3bQ3ULL6 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Upf3bQ3ULL6 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Upf3bQ3ULL6 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Upf3bQ3ULL6 Gm22853-201ENSMUST00000174974 131 ntBASIC2.8□□□□□ -1.96
Upf3bQ3ULL6 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC2.8□□□□□ -1.96
Upf3bQ3ULL6 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Upf3bQ3ULL6 Gm22392-201ENSMUST00000177971 107 ntBASIC2.8□□□□□ -1.96
Upf3bQ3ULL6 Gm27608-201ENSMUST00000184822 162 ntBASIC2.8□□□□□ -1.96
Upf3bQ3ULL6 Olfr1055-202ENSMUST00000188023 939 ntBASIC2.8□□□□□ -1.96
Upf3bQ3ULL6 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC2.8□□□□□ -1.96
Upf3bQ3ULL6 Gm44718-201ENSMUST00000206886 359 ntBASIC2.8□□□□□ -1.96
Upf3bQ3ULL6 Gm35262-201ENSMUST00000215133 267 ntBASIC2.8□□□□□ -1.96
Upf3bQ3ULL6 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Upf3bQ3ULL6 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
Upf3bQ3ULL6 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm12891-201ENSMUST00000119358 240 ntBASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm12042-201ENSMUST00000120479 301 ntBASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm22718-201ENSMUST00000122701 315 ntBASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Mup-ps12-201ENSMUST00000126217 549 ntBASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm23587-201ENSMUST00000157658 84 ntBASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm26411-201ENSMUST00000157668 107 ntBASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm22769-201ENSMUST00000158367 98 ntBASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm20534-201ENSMUST00000172957 172 ntBASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm29299-201ENSMUST00000185609 923 ntBASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3bQ3ULL6 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms