Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm25308-201ENSMUST00000104171 158 ntBASIC4.77□□□□□ -1.65
Rnf180Q3U827 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Rnf180Q3U827 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.77□□□□□ -1.65
Rnf180Q3U827 Mir1195-201ENSMUST00000116818 98 ntBASIC4.77□□□□□ -1.65
Rnf180Q3U827 Gm6797-201ENSMUST00000119440 512 ntBASIC4.77□□□□□ -1.65
Rnf180Q3U827 Gm11718-201ENSMUST00000119942 537 ntBASIC4.77□□□□□ -1.65
Rnf180Q3U827 Gm24635-201ENSMUST00000122712 128 ntBASIC4.77□□□□□ -1.65
Rnf180Q3U827 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Rnf180Q3U827 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.77□□□□□ -1.65
Rnf180Q3U827 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Rnf180Q3U827 Gm37757-201ENSMUST00000193072 210 ntBASIC4.77□□□□□ -1.65
Rnf180Q3U827 Trbv24-201ENSMUST00000194614 347 ntBASIC4.77□□□□□ -1.65
Rnf180Q3U827 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.77□□□□□ -1.65
Rnf180Q3U827 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Rnf180Q3U827 Gm43925-201ENSMUST00000203498 206 ntBASIC4.77□□□□□ -1.65
Rnf180Q3U827 Gm44295-201ENSMUST00000203805 437 ntBASIC4.77□□□□□ -1.65
Rnf180Q3U827 Gm19908-201ENSMUST00000204684 391 ntBASIC4.77□□□□□ -1.65
Rnf180Q3U827 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC4.77□□□□□ -1.65
Rnf180Q3U827 AL929417.1-201ENSMUST00000214901 124 ntBASIC4.77□□□□□ -1.65
Rnf180Q3U827 AC147633.1-201ENSMUST00000225134 259 ntBASIC4.77□□□□□ -1.65
Rnf180Q3U827 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.77□□□□□ -1.65
Rnf180Q3U827 Mir99a-201ENSMUST00000083596 65 ntBASIC4.77□□□□□ -1.65
Rnf180Q3U827 Gm3867-201ENSMUST00000086108 279 ntBASIC4.77□□□□□ -1.65
Rnf180Q3U827 Gm24817-201ENSMUST00000093672 105 ntBASIC4.77□□□□□ -1.65
Rnf180Q3U827 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Rnf180Q3U827 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Rnf180Q3U827 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Rnf180Q3U827 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Rnf180Q3U827 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Rnf180Q3U827 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Rnf180Q3U827 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Rnf180Q3U827 Gm44027-201ENSMUST00000203419 3480 ntBASIC4.77□□□□□ -1.65
Rnf180Q3U827 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Rnf180Q3U827 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.76□□□□□ -1.65
Rnf180Q3U827 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.76□□□□□ -1.65
Rnf180Q3U827 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Rnf180Q3U827 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Rnf180Q3U827 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Rnf180Q3U827 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
Rnf180Q3U827 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Rnf180Q3U827 Gm23697-201ENSMUST00000103897 110 ntBASIC4.76□□□□□ -1.65
Rnf180Q3U827 Gm24318-201ENSMUST00000104490 131 ntBASIC4.76□□□□□ -1.65
Rnf180Q3U827 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Rnf180Q3U827 Gm14566-201ENSMUST00000118915 321 ntBASIC4.76□□□□□ -1.65
Rnf180Q3U827 Gm13064-201ENSMUST00000119125 557 ntBASIC4.76□□□□□ -1.65
Rnf180Q3U827 Gm14364-201ENSMUST00000129209 267 ntBASIC4.76□□□□□ -1.65
Rnf180Q3U827 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Rnf180Q3U827 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC4.76□□□□□ -1.65
Rnf180Q3U827 Gm24810-201ENSMUST00000175317 70 ntBASIC4.76□□□□□ -1.65
Rnf180Q3U827 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Rnf180Q3U827 Gm28098-201ENSMUST00000191361 699 ntBASIC4.76□□□□□ -1.65
Rnf180Q3U827 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.76□□□□□ -1.65
Rnf180Q3U827 Gm38050-201ENSMUST00000191904 238 ntBASIC4.76□□□□□ -1.65
Rnf180Q3U827 Gm37889-201ENSMUST00000194174 251 ntBASIC4.76□□□□□ -1.65
Rnf180Q3U827 Igkv2-105-201ENSMUST00000196931 377 ntBASIC4.76□□□□□ -1.65
Rnf180Q3U827 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.76□□□□□ -1.65
Rnf180Q3U827 Gm44879-201ENSMUST00000207007 503 ntBASIC4.76□□□□□ -1.65
Rnf180Q3U827 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Rnf180Q3U827 AC125223.1-203ENSMUST00000225304 498 ntBASIC4.76□□□□□ -1.65
Rnf180Q3U827 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Rnf180Q3U827 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Rnf180Q3U827 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Rnf180Q3U827 Gm25512-201ENSMUST00000083863 107 ntBASIC4.76□□□□□ -1.65
Rnf180Q3U827 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Rnf180Q3U827 Gm7381-201ENSMUST00000098958 300 ntBASIC4.76□□□□□ -1.65
Rnf180Q3U827 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Rnf180Q3U827 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Rnf180Q3U827 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Rnf180Q3U827 Gm14421-201ENSMUST00000121755 1958 ntBASIC4.76□□□□□ -1.65
Rnf180Q3U827 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.76□□□□□ -1.65
Rnf180Q3U827 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Rnf180Q3U827 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Rnf180Q3U827 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Rnf180Q3U827 Gm38706-201ENSMUST00000182397 2617 ntBASIC4.76□□□□□ -1.65
Rnf180Q3U827 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.76□□□□□ -1.65
Rnf180Q3U827 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Rnf180Q3U827 Gm44120-201ENSMUST00000203022 3023 ntBASIC4.75□□□□□ -1.65
Rnf180Q3U827 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Rnf180Q3U827 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Rnf180Q3U827 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Rnf180Q3U827 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Rnf180Q3U827 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Rnf180Q3U827 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Rnf180Q3U827 Gm14469-201ENSMUST00000118363 202 ntBASIC4.75□□□□□ -1.65
Rnf180Q3U827 Gm16428-201ENSMUST00000121193 723 ntBASIC4.75□□□□□ -1.65
Rnf180Q3U827 Gm23867-201ENSMUST00000122649 274 ntBASIC4.75□□□□□ -1.65
Rnf180Q3U827 Gm26348-201ENSMUST00000157528 240 ntBASIC4.75□□□□□ -1.65
Rnf180Q3U827 Gm24537-201ENSMUST00000157950 102 ntBASIC4.75□□□□□ -1.65
Rnf180Q3U827 Gm25519-201ENSMUST00000158392 127 ntBASIC4.75□□□□□ -1.65
Rnf180Q3U827 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.75□□□□□ -1.65
Rnf180Q3U827 Gm7258-201ENSMUST00000179317 300 ntBASIC4.75□□□□□ -1.65
Rnf180Q3U827 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.75□□□□□ -1.65
Rnf180Q3U827 Gm28255-201ENSMUST00000187101 694 ntBASIC4.75□□□□□ -1.65
Rnf180Q3U827 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC4.75□□□□□ -1.65
Rnf180Q3U827 Gm7948-201ENSMUST00000212607 844 ntBASIC4.75□□□□□ -1.65
Rnf180Q3U827 AC125020.2-201ENSMUST00000218894 348 ntBASIC4.75□□□□□ -1.65
Rnf180Q3U827 AC155929.1-201ENSMUST00000220217 1276 ntBASIC4.75□□□□□ -1.65
Rnf180Q3U827 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.75□□□□□ -1.65
Rnf180Q3U827 AC163646.2-201ENSMUST00000227962 141 ntBASIC4.75□□□□□ -1.65
Rnf180Q3U827 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 112.5 ms