Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm13009-201ENSMUST00000121307 267 ntBASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Gm14473-201ENSMUST00000122269 557 ntBASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Gm22960-201ENSMUST00000122517 104 ntBASIC3.71□□□□□ -1.82
Col28a1Q2UY11 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Gm7846-201ENSMUST00000145844 274 ntBASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Gm22563-201ENSMUST00000157333 269 ntBASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Gm23781-201ENSMUST00000157940 308 ntBASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Gm24192-201ENSMUST00000157978 145 ntBASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Gm22765-201ENSMUST00000158371 128 ntBASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Gm23977-201ENSMUST00000177871 74 ntBASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Mir6996-201ENSMUST00000183922 61 ntBASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Gm36964-201ENSMUST00000191876 198 ntBASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Gm43814-201ENSMUST00000197851 413 ntBASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Gm7468-201ENSMUST00000203900 652 ntBASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Gm7786-201ENSMUST00000210494 436 ntBASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Gm45796-201ENSMUST00000212483 114 ntBASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Gm7034-201ENSMUST00000218638 645 ntBASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Gm18696-201ENSMUST00000220103 274 ntBASIC3.71□□□□□ -1.82
Col28a1Q2UY11 CT030184.1-201ENSMUST00000222393 416 ntBASIC3.71□□□□□ -1.82
Col28a1Q2UY11 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.71□□□□□ -1.82
Col28a1Q2UY11 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.71□□□□□ -1.82
Col28a1Q2UY11 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Gm25699-201ENSMUST00000082896 167 ntBASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Gm23851-201ENSMUST00000083831 103 ntBASIC3.71□□□□□ -1.82
Col28a1Q2UY11 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Col28a1Q2UY11 Gm43924-201ENSMUST00000204851 1736 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm23691-201ENSMUST00000101878 107 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm11673-201ENSMUST00000117846 331 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm11268-201ENSMUST00000118347 267 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm6797-201ENSMUST00000119440 512 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm13804-201ENSMUST00000119552 172 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm14927-201ENSMUST00000120283 454 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm5123-201ENSMUST00000121905 837 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm25784-201ENSMUST00000122524 81 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm22208-201ENSMUST00000122658 110 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm5755-201ENSMUST00000152394 837 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm25150-201ENSMUST00000157121 60 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm23959-201ENSMUST00000157208 324 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm23332-201ENSMUST00000157424 275 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm24289-201ENSMUST00000157629 135 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm25334-201ENSMUST00000158036 110 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm26024-201ENSMUST00000158657 322 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Mir1251-201ENSMUST00000175486 84 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm25817-201ENSMUST00000177758 121 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm24766-201ENSMUST00000179182 121 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm29038-201ENSMUST00000191543 678 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm6510-201ENSMUST00000195916 574 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Igkv11-114-201ENSMUST00000200013 346 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm43155-201ENSMUST00000202661 494 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm8820-201ENSMUST00000204077 571 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm44794-201ENSMUST00000206550 411 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm45588-201ENSMUST00000211213 630 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.7□□□□□ -1.82
Col28a1Q2UY11 AC156559.1-201ENSMUST00000224158 222 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 AC129308.2-201ENSMUST00000224588 789 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm8675-201ENSMUST00000201408 1856 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Gm38388-201ENSMUST00000195569 1430 ntBASIC3.7□□□□□ -1.82
Col28a1Q2UY11 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm37742-201ENSMUST00000193263 3979 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms