Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.97□□□□□ -1.93
Sox3P53784 Gm44720-201ENSMUST00000206076 260 ntBASIC2.97□□□□□ -1.93
Sox3P53784 Gm45912-201ENSMUST00000210646 543 ntBASIC2.97□□□□□ -1.93
Sox3P53784 AC113305.1-201ENSMUST00000214664 724 ntBASIC2.97□□□□□ -1.93
Sox3P53784 AC154329.2-201ENSMUST00000225257 383 ntBASIC2.97□□□□□ -1.93
Sox3P53784 CT572983.1-201ENSMUST00000226895 514 ntBASIC2.97□□□□□ -1.93
Sox3P53784 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC2.97□□□□□ -1.93
Sox3P53784 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Sox3P53784 Gm42721-201ENSMUST00000197165 1523 ntBASIC2.97□□□□□ -1.93
Sox3P53784 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
Sox3P53784 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
Sox3P53784 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
Sox3P53784 Gm18337-201ENSMUST00000219023 5762 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Sox3P53784 Gm20679-201ENSMUST00000177285 1402 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm14404-201ENSMUST00000119117 1660 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Sox3P53784 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Sox3P53784 Gm16445-201ENSMUST00000120399 714 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm15142-201ENSMUST00000121013 856 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Sox3P53784 Gm24358-201ENSMUST00000158424 288 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Sox3P53784 Mir3106-201ENSMUST00000175401 82 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Mir5118-201ENSMUST00000175551 67 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm21842-201ENSMUST00000177552 498 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm21626-201ENSMUST00000177791 498 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm21562-201ENSMUST00000177888 498 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm21539-201ENSMUST00000177925 498 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Sox3P53784 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Sox3P53784 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Sox3P53784 Gm17522-201ENSMUST00000178144 498 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm21599-201ENSMUST00000178249 498 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Sox3P53784 Gm21914-201ENSMUST00000178452 498 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Sox3P53784 Gm21723-201ENSMUST00000178692 498 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm21916-201ENSMUST00000178771 498 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm21801-201ENSMUST00000178865 498 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm21633-201ENSMUST00000178941 498 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Sox3P53784 Gm21821-201ENSMUST00000179646 498 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm21588-201ENSMUST00000180074 498 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm21780-201ENSMUST00000180128 498 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm21572-201ENSMUST00000180134 498 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm21529-201ENSMUST00000180175 498 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm29370-202ENSMUST00000187476 499 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC2.96□□□□□ -1.94
Sox3P53784 Ighv1-40-201ENSMUST00000194231 345 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm37817-201ENSMUST00000195276 434 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm19620-201ENSMUST00000195972 434 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC2.96□□□□□ -1.94
Sox3P53784 Gm43043-201ENSMUST00000196579 412 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm43070-201ENSMUST00000196938 415 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm42958-201ENSMUST00000197595 318 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm17893-201ENSMUST00000203017 770 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm44727-201ENSMUST00000204225 451 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm45380-201ENSMUST00000210465 315 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC2.96□□□□□ -1.94
Sox3P53784 Gm35558-202ENSMUST00000221819 499 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC2.96□□□□□ -1.94
Sox3P53784 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
Sox3P53784 AC158979.1-201ENSMUST00000223594 2252 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Sox3P53784 Gm14910-201ENSMUST00000121037 1805 ntBASIC2.96□□□□□ -1.94
Sox3P53784 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC2.95□□□□□ -1.94
Sox3P53784 AC164297.4-201ENSMUST00000224225 1307 ntBASIC2.95□□□□□ -1.94
Sox3P53784 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
Sox3P53784 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Sox3P53784 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.95□□□□□ -1.94
Sox3P53784 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.95□□□□□ -1.94
Sox3P53784 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Sox3P53784 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Sox3P53784 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Sox3P53784 Gm7974-201ENSMUST00000117154 408 ntBASIC2.95□□□□□ -1.94
Sox3P53784 Gm14880-201ENSMUST00000117581 292 ntBASIC2.95□□□□□ -1.94
Sox3P53784 Gm11429-201ENSMUST00000119089 144 ntBASIC2.95□□□□□ -1.94
Sox3P53784 Gm13555-201ENSMUST00000121668 319 ntBASIC2.95□□□□□ -1.94
Sox3P53784 Snrpert-201ENSMUST00000121967 279 ntBASIC2.95□□□□□ -1.94
Sox3P53784 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Sox3P53784 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC2.95□□□□□ -1.94
Sox3P53784 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC2.95□□□□□ -1.94
Sox3P53784 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC2.95□□□□□ -1.94
Sox3P53784 Gm28785-201ENSMUST00000187478 379 ntBASIC2.95□□□□□ -1.94
Sox3P53784 Gm18748-201ENSMUST00000198507 622 ntBASIC2.95□□□□□ -1.94
Sox3P53784 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Sox3P53784 Gm44274-201ENSMUST00000203417 256 ntBASIC2.95□□□□□ -1.94
Sox3P53784 Gm5322-201ENSMUST00000206142 699 ntBASIC2.95□□□□□ -1.94
Sox3P53784 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC2.95□□□□□ -1.94
Sox3P53784 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Sox3P53784 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Sox3P53784 Gm22979-201ENSMUST00000082609 159 ntBASIC2.95□□□□□ -1.94
Sox3P53784 Gm23136-201ENSMUST00000083425 99 ntBASIC2.95□□□□□ -1.94
Sox3P53784 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Sox3P53784 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Sox3P53784 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Sox3P53784 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
Sox3P53784 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Sox3P53784 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms