Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 AC153881.3-201ENSMUST00000218494 1561 ntBASIC2.83□□□□□ -1.96
Col2a1P28481 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Col2a1P28481 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Col2a1P28481 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
Col2a1P28481 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
Col2a1P28481 Gm13314-201ENSMUST00000118742 335 ntBASIC2.83□□□□□ -1.96
Col2a1P28481 Gm11414-201ENSMUST00000121795 263 ntBASIC2.83□□□□□ -1.96
Col2a1P28481 Gm14848-201ENSMUST00000121850 467 ntBASIC2.83□□□□□ -1.96
Col2a1P28481 Snora81-201ENSMUST00000157310 178 ntBASIC2.83□□□□□ -1.96
Col2a1P28481 Gm22084-201ENSMUST00000157585 105 ntBASIC2.83□□□□□ -1.96
Col2a1P28481 Gm18358-201ENSMUST00000173179 1277 ntBASIC2.83□□□□□ -1.96
Col2a1P28481 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC2.83□□□□□ -1.96
Col2a1P28481 Gm27535-201ENSMUST00000183814 157 ntBASIC2.83□□□□□ -1.96
Col2a1P28481 Gm28146-201ENSMUST00000185517 701 ntBASIC2.83□□□□□ -1.96
Col2a1P28481 Gm38333-201ENSMUST00000193608 604 ntBASIC2.83□□□□□ -1.96
Col2a1P28481 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC2.83□□□□□ -1.96
Col2a1P28481 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC2.83□□□□□ -1.96
Col2a1P28481 Gm45105-201ENSMUST00000207824 397 ntBASIC2.83□□□□□ -1.96
Col2a1P28481 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC2.83□□□□□ -1.96
Col2a1P28481 Gm45240-201ENSMUST00000211437 674 ntBASIC2.83□□□□□ -1.96
Col2a1P28481 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC2.83□□□□□ -1.96
Col2a1P28481 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.83□□□□□ -1.96
Col2a1P28481 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC2.83□□□□□ -1.96
Col2a1P28481 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.83□□□□□ -1.96
Col2a1P28481 Gm5374-201ENSMUST00000222868 657 ntBASIC2.83□□□□□ -1.96
Col2a1P28481 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Col2a1P28481 AC105407.3-201ENSMUST00000224161 648 ntBASIC2.83□□□□□ -1.96
Col2a1P28481 AC144819.1-201ENSMUST00000227015 620 ntBASIC2.83□□□□□ -1.96
Col2a1P28481 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Col2a1P28481 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Col2a1P28481 n-R5s220-201ENSMUST00000082926 120 ntBASIC2.83□□□□□ -1.96
Col2a1P28481 Gm25628-201ENSMUST00000084002 105 ntBASIC2.83□□□□□ -1.96
Col2a1P28481 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
Col2a1P28481 Gm43320-201ENSMUST00000196047 2916 ntBASIC2.82□□□□□ -1.96
Col2a1P28481 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Col2a1P28481 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.82□□□□□ -1.96
Col2a1P28481 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Col2a1P28481 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Col2a1P28481 n-R5s52-201ENSMUST00000104614 113 ntBASIC2.82□□□□□ -1.96
Col2a1P28481 Gm12584-201ENSMUST00000117109 1105 ntBASIC2.82□□□□□ -1.96
Col2a1P28481 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Col2a1P28481 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Col2a1P28481 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
Col2a1P28481 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Col2a1P28481 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC2.82□□□□□ -1.96
Col2a1P28481 Gm25120-201ENSMUST00000180148 79 ntBASIC2.82□□□□□ -1.96
Col2a1P28481 Mir6363-201ENSMUST00000184880 114 ntBASIC2.82□□□□□ -1.96
Col2a1P28481 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC2.82□□□□□ -1.96
Col2a1P28481 Gm28788-201ENSMUST00000189717 375 ntBASIC2.82□□□□□ -1.96
Col2a1P28481 Gm29558-201ENSMUST00000190134 375 ntBASIC2.82□□□□□ -1.96
Col2a1P28481 Mir1892-201ENSMUST00000197752 80 ntBASIC2.82□□□□□ -1.96
Col2a1P28481 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.82□□□□□ -1.96
Col2a1P28481 Gm34701-202ENSMUST00000204685 360 ntBASIC2.82□□□□□ -1.96
Col2a1P28481 Gm44903-201ENSMUST00000206840 130 ntBASIC2.82□□□□□ -1.96
Col2a1P28481 AC116589.9-201ENSMUST00000221462 908 ntBASIC2.82□□□□□ -1.96
Col2a1P28481 AC168880.1-201ENSMUST00000225113 707 ntBASIC2.82□□□□□ -1.96
Col2a1P28481 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Col2a1P28481 Gm23975-201ENSMUST00000082685 106 ntBASIC2.82□□□□□ -1.96
Col2a1P28481 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Col2a1P28481 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Col2a1P28481 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
Col2a1P28481 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Col2a1P28481 Gm37965-201ENSMUST00000195304 1362 ntBASIC2.81□□□□□ -1.96
Col2a1P28481 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.81□□□□□ -1.96
Col2a1P28481 Gm37407-201ENSMUST00000194793 1316 ntBASIC2.81□□□□□ -1.96
Col2a1P28481 Gm6757-201ENSMUST00000189810 1706 ntBASIC2.81□□□□□ -1.96
Col2a1P28481 Gm7648-201ENSMUST00000173036 1658 ntBASIC2.81□□□□□ -1.96
Col2a1P28481 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Col2a1P28481 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.81□□□□□ -1.96
Col2a1P28481 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.81□□□□□ -1.96
Col2a1P28481 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Col2a1P28481 Gm21489-201ENSMUST00000189668 818 ntBASIC2.81□□□□□ -1.96
Col2a1P28481 Gm38332-201ENSMUST00000194189 147 ntBASIC2.81□□□□□ -1.96
Col2a1P28481 Gm5317-201ENSMUST00000204445 847 ntBASIC2.81□□□□□ -1.96
Col2a1P28481 Gm8031-201ENSMUST00000213430 626 ntBASIC2.81□□□□□ -1.96
Col2a1P28481 Gm46103-201ENSMUST00000217614 341 ntBASIC2.81□□□□□ -1.96
Col2a1P28481 Gm8274-201ENSMUST00000219820 463 ntBASIC2.81□□□□□ -1.96
Col2a1P28481 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
Col2a1P28481 AC124549.2-201ENSMUST00000224243 222 ntBASIC2.81□□□□□ -1.96
Col2a1P28481 AC140210.1-201ENSMUST00000224961 534 ntBASIC2.81□□□□□ -1.96
Col2a1P28481 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC2.81□□□□□ -1.96
Col2a1P28481 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Col2a1P28481 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Col2a1P28481 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
Col2a1P28481 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC2.81□□□□□ -1.96
Col2a1P28481 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Col2a1P28481 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
Col2a1P28481 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Col2a1P28481 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Col2a1P28481 Gm14795-201ENSMUST00000118461 471 ntBASIC2.8□□□□□ -1.96
Col2a1P28481 Gm12954-201ENSMUST00000118610 611 ntBASIC2.8□□□□□ -1.96
Col2a1P28481 Gm13678-201ENSMUST00000118926 340 ntBASIC2.8□□□□□ -1.96
Col2a1P28481 Gm14119-201ENSMUST00000119511 235 ntBASIC2.8□□□□□ -1.96
Col2a1P28481 Gm13687-201ENSMUST00000119857 282 ntBASIC2.8□□□□□ -1.96
Col2a1P28481 Gm13341-201ENSMUST00000120780 672 ntBASIC2.8□□□□□ -1.96
Col2a1P28481 Gm25102-201ENSMUST00000122479 112 ntBASIC2.8□□□□□ -1.96
Col2a1P28481 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.8□□□□□ -1.96
Col2a1P28481 Gm24532-201ENSMUST00000157951 286 ntBASIC2.8□□□□□ -1.96
Col2a1P28481 Gm24771-201ENSMUST00000158508 137 ntBASIC2.8□□□□□ -1.96
Col2a1P28481 Gm16569-201ENSMUST00000160526 314 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms